Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01959 ATGAATGGGAAAATGCAGAACGAGAAGCATGACTTGGTGCCTTCCACTGCGGACGACGTCGTTAACGATGCCAGCGTGGACTATGAGACCCTCATCCTCAGCCAGGACCTGTTTTGCACGCAGGATTACCTGACCCCAGATAACCAGTTTCCTTTGAAAGGCTTCGATTGCAACTTCGACTTGGAAGAGGAAGATGGCCCTTGCCCCAAGTCACCAGTGAAGCCAAGTACTTCAAAAAGCAAGAGATGCCGAATGGATGCTATCTCGGGAGATGCTCTCAGCTCTAACTTGTCTGGTGGTGATCATCAGCCAATTGTGGACCTTGGAAAGGACTTTGTTGAAGATGAAATCACTGATAAGCCGAAGGCTCGAAATTTTGTGTCTCATTCTGCAGTTGCATTGCGTTGCAGGGTTATGACTCCTCGCTGCATTGGAAACCCCTATTTTAAAAGCCTTTCAGAAAATGAAATGGATCCTTTTGGAAGCCAAAGATCAAAATTTGAAGGCCTCTTCCCTGGACTTACTGGTGATTATTGTGTTCCCCGCTACCGCACTGACTTTCATGAGATTGAGCAAATTGGTAGAGGTCACTTTAGCAATGTTTTCAAAGTATTGAACCGAATAGATGGCTGCTTGTATGCTGTGAAACGCAGCATCAGGAAGTTGTGCAGCGAAACAGAAAGTCTTATTATTGACCTTCTTGTTTCTTTAGGTTTCCATGAGAACATTGTGGGCTACTATTCTTCATGGTTTGAAGATGAACAACTGTATATTCAGATGGAGCTATGTGATCACAGCTTATCCATTAACAATTGCCCAGCATTACTTACTGCAGGACATGAAATAGAAGCTTTATATCAGGTTGCCATTGCATTGCAATTTATCCATGAGAGGGGAATAGCTCATCTTGATGTTAAGCCTGAAAATATTTATGTGAAAAATGGTGTTTATAAGCTTGGTGATTTTGGGTGTGCAACTCTACTTGATAATAGCCTGCCAATTGAGGAGGGTGATGCGCGTTATATGCCTCAAGAAATCCTCAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTCTCCCTGGGAGCTTCTATGTTTGAGCTAATTTGCAGGTCGAGTTTGCCAGAATCAGAAACTCAGTCCTTTAATCTTAAAGAGGGAAAGTTGCCACTCTTGCCAGGAGTTTCAGTGAAATTTCAAAACTTGCTTAAGGTCATGATGGACCCTGATCCTGTTAAGAGGCCTTCTGCTACAGAGTTGGTGAAGAGGGTCCTTAGAATAGAAAAAAATTGA 1296 0.429 MNGKMQNEKHDLVPSTADDVVNDASVDYETLILSQDLFCTQDYLTPDNQFPLKGFDCNFDLEEEDGPCPKSPVKPSTSKSKRCRMDAISGDALSSNLSGGDHQPIVDLGKDFVEDEITDKPKARNFVSHSAVALRCRVMTPRCIGNPYFKSLSENEMDPFGSQRSKFEGLFPGLTGDYCVPRYRTDFHEIEQIGRGHFSNVFKVLNRIDGCLYAVKRSIRKLCSETESLIIDLLVSLGFHENIVGYYSSWFEDEQLYIQMELCDHSLSINNCPALLTAGHEIEALYQVAIALQFIHERGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASMFELICRSSLPESETQSFNLKEGKLPLLPGVSVKFQNLLKVMMDPDPVKRPSATELVKRVLRIEKN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01959 431 ProSiteProfiles Protein kinase domain profile. 187 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01959 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Pumo1g01959 431 SUPERFAMILY Protein kinase-like (PK-like) 183 423 IPR011009 -
Pumo1g01959 431 Pfam Protein kinase domain 187 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01959 431 FunFam Wee1-like protein kinase 262 429 - -
Pumo1g01959 431 Gene3D Phosphorylase Kinase; domain 1 178 263 - -
Pumo1g01959 431 SMART serkin_6 187 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01959 431 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 139 423 - -
Pumo1g01959 431 ProSitePatterns Protein kinases ATP-binding region signature. 193 221 IPR017441 GO:0005524
Pumo1g01959 431 Gene3D Transferase(Phosphotransferase) domain 1 270 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01959 Pumo-Chr1 42052757 42056456 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01959 22 422 Core Cell Cycle Gene Families AT1G02970 57.590 9.43e-159 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Pumo1g01959 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01959 K06632 - gmx:100784055 630.557