Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01949 ATGGCCATTTTTCCATTTACAGGTCTAAGGCATTATGGATCCCAACAACTCGCTCACCTAAAAATCATAGTTCCATTAATTAATACTCCAAACCAAACCAATATTTATATCACAATTGGAGTAGACGTTCAATACTCACTCATCACTATGGAAGTGCATATTATATTAATAATAATTTTGTGCATTATTCCGTGGCTCTCCCTGCAGGTTAGTGGTGGTAAGGTTCCGGCAATGATCGTGTTCGGGGACTCATCGGTTGATGCTGGGAACAACAATTACATAGCAACGGTTGCTCGGAGCAATTTTGAGCCATATGGGCGTGACTTTGTCGGTGGGAAGCCAACTGGGAGATTCAGCAATGGCCGAATAGCAACAGATTTCTTATCCCAAGCCTTTGGAATCAAACCCTATGTGCCCCCATACTTGGATCCTAACCATAACATTTCACACTTCGCCACTGGGGTCACTTTTGCTTCTGCCGCAACTGGCTATGACAATGCTACTTCAGATGTGCTTTCTGTGATACCATTATGGAAGCAGTTGGAGTACTATAAAGGATACCAAAAGAAACTGAGTGTGTATCTTGGAAAAAGTAGGGCAAATGAGACAGTCGCAAAAGCATTGCACATAATAAGTCTGGGAACAAATGACTTCCTAGAAAACTATTTTGCAATCCCTGGTGGCAGGGCATCACAATACACACCAAGAGAGTATCAAAATTTTCTGGCTGGGGTAGCTGAGAATTTCATCCACAAGCTCTATTTTCTTGGTGCTAGAAAAATATCTTTGGGGGGTTTACCTCCCATGGGGTGCTTGCCACTGGAGAGAACCACAAATTTTGTTGGTGGTAATGACTGTGTGCCCAGTTACAATAACATTGCATTGGAGTTCAATGACAAACTCAGTAAGTTAACAACCAGGTTGAAGAAGGACCTTCCTGGGATCAGATTGGTATTTTCAAATCCGTATGATATTTTGTTGCATATCATTAAAAGGCCCGCTCAGTATGGGTTTCAGGTGACCTCAATGTCATGTTGTGCTACTGGAATGTTTGAGATGGGATACGCATGCAGCAGGGCCAGTTCTTTCAGTTGCATAGATGCTTCCAAATATGTATTTTGGGACTCATTCCATCCAACGGAGAAAACCAATGGTATCATTGCAAAGTACCTCGTGAAGAACGCATTAGCTCAATTTTTGCATTAA 1206 0.4204 MAIFPFTGLRHYGSQQLAHLKIIVPLINTPNQTNIYITIGVDVQYSLITMEVHIILIIILCIIPWLSLQVSGGKVPAMIVFGDSSVDAGNNNYIATVARSNFEPYGRDFVGGKPTGRFSNGRIATDFLSQAFGIKPYVPPYLDPNHNISHFATGVTFASAATGYDNATSDVLSVIPLWKQLEYYKGYQKKLSVYLGKSRANETVAKALHIISLGTNDFLENYFAIPGGRASQYTPREYQNFLAGVAENFIHKLYFLGARKISLGGLPPMGCLPLERTTNFVGGNDCVPSYNNIALEFNDKLSKLTTRLKKDLPGIRLVFSNPYDILLHIIKRPAQYGFQVTSMSCCATGMFEMGYACSRASSFSCIDASKYVFWDSFHPTEKTNGIIAKYLVKNALAQFLH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01949 401 Gene3D SGNH hydrolase 69 397 IPR036514 -
Pumo1g01949 401 Pfam GDSL-like Lipase/Acylhydrolase 79 391 IPR001087 GO:0016788
Pumo1g01949 401 FunFam GDSL esterase/lipase APG 68 396 - -
Pumo1g01949 401 CDD SGNH_plant_lipase_like 76 391 IPR035669 -
Pumo1g01949 401 PANTHER GDSL ESTERASE/LIPASE EXL3 58 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01949 Pumo-Chr1 41908538 41912985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01949 50 397 Pollen Coat Proteome AT1G75910 36.338 3.62e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01949 - - gmx:100820032 644.425