Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01942 ATGGCTACCACGATTCGTCTTTGTCTTTGCTTCTCCATCACAGTCCTTCAACTCATCTCCACATTAGCTCAATCTGAAAATTATATCATCCACATGGACCTATCATCCATGCCCAAACCATTCTCCAGCAAACACAGTTGGTATCTCTCCACTCTTTCTTCTGCACTAGACACCAATGACAATATTCTCAACACAGCTTCTTCTAAGCTGATTTATACCTACACCAACATCATGAATGGTTTTAGTGCAAATTTGTCACCTAAGGAACTTGAAGCCCTCAAAACCTCCCCAGGTTACATTTCTTCCACACCAGATCTGCAAGCGAAGCTTCACACAACACACTCACCCCAATTCCTTGGCCTCAATCCCAATGTAGGGGCATGGCCTGCTTCGAAATTTGGCGAAGATGTCATTGTTGGGATGGTGGACAGTGGACTTTGGCCAGAAAGTGAAAGCTTCAAAGATGAAGGGATGACTGAAATTCCTTCACGGTGGAAAGGCCAATGTGAAAGTAGCATCAAATGCAACAAGAAACTCATTGGAGCTCGGCTCTTTGACAAAGCGTTCCATCGTGTTCGTGCCAAATACCCTATTCTCACAACATTTGAGTACTCAACTAGGGACACAGAAGGTCACGGGACACACATATCAAGCATCGCAGTTGGGATCCAAGTTGAGAATGTTTCATTCTTTGGCTATGCCAATGGATCAGCGCAAGGAATAGCTTCACGGGCGAGAATAGCCACGTACAAGGCCGTGTGGGACCGTAAAGCTCACTCAATTGATGTATTAGCCGCGATTGATAGTGCAATCTCAGATGGGGTTGATGTTCTTTCCTTATCACTTGGCTTTGGTAATATAGACATGTACAATGACCCCATTTCTGTAGCCACGTTTGCAGCCATGGAGAAAGGTATTTTTGTGTCCACGTCAGCAGGGAATGCTGGCCCTGATCGTGGAACCCTAAATAGTGCAGTACCATGGGTCATAAACGTGGCTGCTGGCACTTTGGATCGTGAATTTCAAGGGACTCTTGCTCTTGGCAATGGGGTCAACATACCTGGCTTGTCACTCTTTCTAGGAAACTTGTCCGTACACCAAGTTCCTATTGTTTTTCTGGACTCGTGCGACAATTCGAAGAAATTTGCCAATGTGAGTGGCAAGATTGTGGTGTGTGATGATAGGAATAATGGTAGATATCAAGTACCACTGTCAATTCAAGTGAGTAATGTGCATTGGTCAAATGCTGCCGCGGGAGTGTTCATATCAAGTACCAATGACACGTCGTTTTTTTTAAGCAATGGTTCTGCAGGCATCATTATTAACCCGGGAAATGGAGAAATTGTCATCGCTTACATCAAGAGTGGTAATAACTCTGATGCAGAAGCAAGCATGTCTTTTAAGACAACAGCTTTAGGTACTAAACCAGCACCGAGTGTGGATAGTTACAGTTCCAGAGGGCCTTCAAGTAGTTGTCCACTTGTGTTGAAACCGGACATCACTGCTCCTGGTTCATCAATCTTGGCTGCATGGCCTCCAAATCTTCCAGTGGCATTGTTTGGGTCCCAAAACCTTTCCAGTAACTTCAATTTTGTAAGTGGAACATCCATGGCATGCCCTCACGTGGCAGGTGTGGGAGCACTGTTAAGAGGAGCACACCCTGATTGGAGCCCTGCAGCAATTAGGTCAGCCATTATGACAACATCTGATATATTCGATAATACTAAGGAACTCATTAAGGACATTGGTGATGATTACAATCCAGCCACTCCTTTAGCTGTGGGAGCTGGTCATGTCAACCCCAACAAAGCCCTTGACCCTGGACTTGTTTACGATGTGGGAGTTCAAGATTATGTCAATCTTCTCTGTGCATTGAACTCCACTCAACGGAACATCTCACTCATCACTAGATCCTCTTCTAATAATTGCTCCAATCCTTCCTTGGATCTCAACTACCCTTCTTTCATTGCTATCTTCAGTGGCAATGGTTCTTCTAATGTAACTTGGGAATTTCAGAGAACGGTGACCAATGTTGGGGGGGAGGGACAAACAATCTATACTGCTAGCGTTACACCCATCACAGGGTTTAATGTGAGTGTCATCCCAAGCAAGTTGGTGTTCAAGGAGAAGAACCAGAAGCTAAGTTACAAGTTAAGGATACAAGGTCCAGAGATCGAGGGTTTCGGGTATCTCACTTGGACGGACGTGAAGCATGTGGTGAGGAGCCCTATTGTTGTCACTAGTCCACCACCCCCAACTTCAATTTTTTAG 2271 0.45 MATTIRLCLCFSITVLQLISTLAQSENYIIHMDLSSMPKPFSSKHSWYLSTLSSALDTNDNILNTASSKLIYTYTNIMNGFSANLSPKELEALKTSPGYISSTPDLQAKLHTTHSPQFLGLNPNVGAWPASKFGEDVIVGMVDSGLWPESESFKDEGMTEIPSRWKGQCESSIKCNKKLIGARLFDKAFHRVRAKYPILTTFEYSTRDTEGHGTHISSIAVGIQVENVSFFGYANGSAQGIASRARIATYKAVWDRKAHSIDVLAAIDSAISDGVDVLSLSLGFGNIDMYNDPISVATFAAMEKGIFVSTSAGNAGPDRGTLNSAVPWVINVAAGTLDREFQGTLALGNGVNIPGLSLFLGNLSVHQVPIVFLDSCDNSKKFANVSGKIVVCDDRNNGRYQVPLSIQVSNVHWSNAAAGVFISSTNDTSFFLSNGSAGIIINPGNGEIVIAYIKSGNNSDAEASMSFKTTALGTKPAPSVDSYSSRGPSSSCPLVLKPDITAPGSSILAAWPPNLPVALFGSQNLSSNFNFVSGTSMACPHVAGVGALLRGAHPDWSPAAIRSAIMTTSDIFDNTKELIKDIGDDYNPATPLAVGAGHVNPNKALDPGLVYDVGVQDYVNLLCALNSTQRNISLITRSSSNNCSNPSLDLNYPSFIAIFSGNGSSNVTWEFQRTVTNVGGEGQTIYTASVTPITGFNVSVIPSKLVFKEKNQKLSYKLRIQGPEIEGFGYLTWTDVKHVVRSPIVVTSPPPPTSIF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01942 756 CDD PA_subtilisin_like 347 461 - -
Pumo1g01942 756 ProSitePatterns Serine proteases, subtilase family, histidine active site. 212 222 IPR022398 -
Pumo1g01942 756 Pfam Fibronectin type-III domain 649 746 IPR041469 -
Pumo1g01942 756 FunFam Subtilisin-like protease SBT1.9 17 111 - -
Pumo1g01942 756 Gene3D Peptidase S8/S53 domain 136 618 IPR036852 GO:0004252|GO:0006508
Pumo1g01942 756 Gene3D - 622 748 - -
Pumo1g01942 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 111 IPR037045 -
Pumo1g01942 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 746 IPR045051 -
Pumo1g01942 756 CDD Peptidases_S8_3 109 570 IPR034197 -
Pumo1g01942 756 Gene3D - 338 473 - -
Pumo1g01942 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Pumo1g01942 756 FunFam Subtilisin-like protease SBT1.5 136 349 - -
Pumo1g01942 756 Pfam Subtilase family 134 576 IPR000209 GO:0006508|GO:0008236
Pumo1g01942 756 ProSiteProfiles Serine proteases, subtilase domain profile. 107 605 - -
Pumo1g01942 756 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Pumo1g01942 756 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Pumo1g01942 756 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Pumo1g01942 756 Pfam Peptidase inhibitor I9 28 111 IPR010259 -
Pumo1g01942 756 SUPERFAMILY Subtilisin-like 110 609 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01942 Pumo-Chr1 41561485 41563755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01942 1 735 Subtilisin-like Serine Gene Family AT5G67090 44.312 0.0 588