Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01936 ATGCGGGATAGTGAGAAGAAGTTAAACAACAAAGGATCTAAAAAATCCAGTCCTTTGAAGGTGCGTAAGAAGGGCCAAGGGAAGAAGGATAAAGTGAAAGTGGGATCAAAATCTCACACAAAAAATGTTGGCACTGACATATCAAGGAAGAGAGTTATCTCTTCTCTCAAGATCAAAGGGCCACGTAAGGATTCTTCAGATAAGAAATTGATTACTGGAAACAATTTGCCTATGAAGAACAAAAAATCTTCACAGAAGCCATCCTCAAATTTACAAGGCAAAAAAGCTTCTCTTAGCTCTAGAAAAGAGGGGGAAGATGCTGACGGGGCGGTAAAGCTTCAAAAAATGAAGAGGAAGAGAAAGAAGAAAAGACAAATGAATAATGTGGATCTTGATGATCCTTCACGCCTGCAGAGGAGAACAAGGTATCTTTTAATCAAAATGAAGCTAGAGCATAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGTCAGAGTCGAGAAAAGATTAGGCCAGAAAAGGAGCTACAAAGAGCAAGGAAGCAGATTTTAAAATGTAGACTTGGTATTCGTGATACTATTCACCAGTTAGATTCTCTTGGTTCATTGAGTAGCATTGAAGATTCTGCCATTGCTCCGGATGGATCTGTTTACCATGAACATGTGAGCAAGTATCAACACTTTGAATACTTCATTGCATTTAAACTTCCTCCTGGAGAGCATGGCTGGTTTTGTAAATTTTGTGAATGTAAGATGGAAATACTAGAGGCAATGAATGCTCATCTTGGAACTCACTTCTCCTTGCACATATTCAAAGAAGAGGCTGCTTTACCTGATGGTGAGACTGCATTACTGAATCCTGAAGAAGAATGGCCATCAGATGATTATGAAGATGATGATTATGACCCAGAGAGGAAAGAAGACAGCCACAATATCAATACGGAAGGAACTGATGATAGTGCATCTGATGACTTAAGCAGTTCTACGAGTCTCTGTTCTTCTGATGGTGAATGTTCTCCCGTAGATGGTGTCAGTCATGAATATTTTTCTGTCAATAGCAGCATAGATTCTGATGAGTATGAGGACAAAGCCTGTGGGCATAGGCAGCGAAAAGTTGTTGACTACAAGAAACTTTATGATGAAATGTTTGGGAAGGATGCTCTTGCTTATGAACAATTGAGTGAAGATGAAGACTGGGGTCCTGGCAAAAGAAAGCAAGAGAAAAGGAGTCTGATGCTTGAGAATAAGCACCCCAATAATGAGCACAACAACATAACTAGAAAATATTCTTCAAGCACAAAGATCAAAAGGCGTTGTTTTAGGATTCCGCATGATGCAGTTGAGAAGCTTCGCCAAGTTTTTGCTGAGAACGAACTTCCTCCAAGATCTATAAGAGACGGTCTTTCAAAAGAGCTGGGACTTGACACTGAGAAGATGATGACTTACTTTTGTCTATCCTCATTTGAATTTGCCTATGAAGTTCATCAAGCAGAAGGAGCAGCAGATCAGCTTCAGAGTATCATTTCTACAAAGAACTCCAGATTACAAAATCAGGAGAATGTCGATCTTTCGAAATCAAAGACCTCAAAAATTACTACGACACATTCCCAGAAGGATGTTAAAAATGTCACTGGAAGAAAGAAAACAAAGTCATCTAGCAAGAAAAGACAACCAGAAATTCCTCCACCTCTAGGAGAAAATGGCAACAAGGACTTTATTATGGAGATCAGTGATGACGTGAGCTTGAAGAAGCTGTTGAAGAAAAGAAAGAAGAGGAAGAAGGTAAATTTTACATTTGAAGGAGACTCTCAGGCGGCAGAGTTAGAATTTGAAAGACTAAGCAAATTGAAGACTAAAGTAGATAGTATGAAGCAAAAATTAACTGCAATTCAAAATTATAGAGTTAAGGGTTCAAATGAACCATCCATTGTATATGTACCCACAGCTGTGTTAAGGGAAAAGGTTGAATGA 1974 0.3896 MRDSEKKLNNKGSKKSSPLKVRKKGQGKKDKVKVGSKSHTKNVGTDISRKRVISSLKIKGPRKDSSDKKLITGNNLPMKNKKSSQKPSSNLQGKKASLSSRKEGEDADGAVKLQKMKRKRKKKRQMNNVDLDDPSRLQRRTRYLLIKMKLEHNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCRLGIRDTIHQLDSLGSLSSIEDSAIAPDGSVYHEHVSKYQHFEYFIAFKLPPGEHGWFCKFCECKMEILEAMNAHLGTHFSLHIFKEEAALPDGETALLNPEEEWPSDDYEDDDYDPERKEDSHNINTEGTDDSASDDLSSSTSLCSSDGECSPVDGVSHEYFSVNSSIDSDEYEDKACGHRQRKVVDYKKLYDEMFGKDALAYEQLSEDEDWGPGKRKQEKRSLMLENKHPNNEHNNITRKYSSSTKIKRRCFRIPHDAVEKLRQVFAENELPPRSIRDGLSKELGLDTEKMMTYFCLSSFEFAYEVHQAEGAADQLQSIISTKNSRLQNQENVDLSKSKTSKITTTHSQKDVKNVTGRKKTKSSSKKRQPEIPPPLGENGNKDFIMEISDDVSLKKLLKKRKKRKKVNFTFEGDSQAAELEFERLSKLKTKVDSMKQKLTAIQNYRVKGSNEPSIVYVPTAVLREKVE 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01936 657 MobiDBLite consensus disorder prediction 286 339 - -
Pumo1g01936 657 MobiDBLite consensus disorder prediction 1 134 - -
Pumo1g01936 657 MobiDBLite consensus disorder prediction 70 97 - -
Pumo1g01936 657 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 237 655 - -
Pumo1g01936 657 MobiDBLite consensus disorder prediction 16 30 - -
Pumo1g01936 657 MobiDBLite consensus disorder prediction 98 113 - -
Pumo1g01936 657 MobiDBLite consensus disorder prediction 516 571 - -
Pumo1g01936 657 MobiDBLite consensus disorder prediction 516 540 - -
Pumo1g01936 657 MobiDBLite consensus disorder prediction 316 337 - -
Pumo1g01936 657 MobiDBLite consensus disorder prediction 289 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01936 Pumo-Chr1 41408229 41415171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01936 127 484 Homeobox Transcription Factor Family AT4G29940 46.341 7.79e-97 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01936 - - gmx:100817639 936.406