Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01923 ATGGAGCCCTTCAGATTCGGGCTCCTCCTCCTTTCCTCGTCGCTGTTCTTCACAGCAGAATCGGCGTGCAAGCAGGGGCAGGGCTGTCCACTGGCCCTGGCCTCCTACTACGTATGGGAGGGCTCCAACCTCACCTACGTCTCCACTATCATGGCCTCCACTCTTGTCACCAAAGCCGAGGACATAGTCAGCTACAGCACGGCCACCGTCGCCAACAAGGACAGCGTCAAGGCCGGCGACAGGGTCAACGTGCCCTTCCCCTGCGGCTGCATCAACAACGAGTTTCTCGGTCACACCTTTGAGTACGACGTTCAGTCACAGGATACCTACGAGTATGTCGCCAGGACCGTGTTTTCTAACCTCACCGACGTTGACTGGCTAAGGAGGTTCAATAGCTATCTGCCCGACAACATTCCCGACACGGGAACGCTCAATGTTACGGTCAATTGTTCTTGTGGGAACAGCGATGTTGCCAATTATGGGTTGTTCGTGACCTACCCTCTTAGGATCGGGGACACTCTGGGGTCCGTGGCTGCTAATGTGAGCCTCGACTCGGGGTTGCTACAGAGGTACAATCCTGATGTGAATTTCAACCAGGGGAGTGGACTGGTTTATATTCCCGGAAAAGATCAAAATGGTAGCTTTGTGTTTTTGTCGTCCAGTTCAGGAGGTCTTGCTGGTGGGGCTATTGCAGGAATAGTTGTTGGAATTGTGGCAGGTCTTCTGTTATTGGGAGTTTGTACATATGTCGGATATTTCCGGAAGAAGAAGATACCGAAGGATGAAATTCTTCCACGAGATTCCACTGCACTCTTTGCTCAAGATGGGAAGGATGAAACTTCTCGTAGTAGCGCGAATGAAACTTCAGGACCCGGTGGTCCTGCTGTCATCACAGGCATAACAGTGGACAAATCAGTGGAGTTCTCATATGAGGAACTGGCAACTGCCACGGATAACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGGTCTGTCTATTATGCGGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTGAAAGTCTTGACACGTGTTCATCATCTTAACCTGGTGCGGTTGATCGGATATAGTATCGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACATAAGTCAACATCTGCGTGGTTCAGGTAGTAGAGAACCACTGCCATGGGCTACTCGGGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCACGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGCAAATATATTAATAGACAAAAACTTCCGGGGCAAGGTTGCTGATTTTGGTTTGACCAAACTGACAGAAGTTGGAAGCTCATCGCTTCCCACTGGTCGTCTTGTTGGAACATTTGGATACATGCCACCGGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGACGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCGGCTAAGGAAGCAATTGTCAAGTCAGACGATTCTGTTGCCGACTCAAAGGGCCTCGTAGCTTTGTTTGATGGAGTTTTTAGTCAGCCAGATCCTACGGAAGAGCTCTGCAAACTAGTTGATCCAAGGCTTGGAGATAACTACCCAATTGATTCAGTCCGCAAGATGGCACAACTAGCCAAAGCATGTACACAAGACAATCCCCAACTCCGTCCAAGTATGAGATCTATTGTGGTTGCTCTTATGACACTTTCTTCAACAACAGACGATTGGGATGTTGGTGCCTTCTACGAAAATCAAAATCTTGTGAATCTTATGTCAGGAAGATAG 1863 0.4745 MEPFRFGLLLLSSSLFFTAESACKQGQGCPLALASYYVWEGSNLTYVSTIMASTLVTKAEDIVSYSTATVANKDSVKAGDRVNVPFPCGCINNEFLGHTFEYDVQSQDTYEYVARTVFSNLTDVDWLRRFNSYLPDNIPDTGTLNVTVNCSCGNSDVANYGLFVTYPLRIGDTLGSVAANVSLDSGLLQRYNPDVNFNQGSGLVYIPGKDQNGSFVFLSSSSGGLAGGAIAGIVVGIVAGLLLLGVCTYVGYFRKKKIPKDEILPRDSTALFAQDGKDETSRSSANETSGPGGPAVITGITVDKSVEFSYEELATATDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNISQHLRGSGSREPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKSDDSVADSKGLVALFDGVFSQPDPTEELCKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGAFYENQNLVNLMSGR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01923 620 Gene3D Transferase(Phosphotransferase) domain 1 391 611 - -
Pumo1g01923 620 FunFam PTI1-like tyrosine-protein kinase 3 391 606 - -
Pumo1g01923 620 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01923 620 FunFam LysM receptor kinase 2 299 390 - -
Pumo1g01923 620 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Pumo1g01923 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Pumo1g01923 620 CDD STKc_IRAK 326 589 - -
Pumo1g01923 620 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 605 IPR044812 GO:0019199|GO:0045087
Pumo1g01923 620 Pfam Protein tyrosine and serine/threonine kinase 322 591 IPR001245 GO:0004672|GO:0006468
Pumo1g01923 620 MobiDBLite consensus disorder prediction 274 291 - -
Pumo1g01923 620 MobiDBLite consensus disorder prediction 274 294 - -
Pumo1g01923 620 SMART serkin_6 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01923 620 SUPERFAMILY Protein kinase-like (PK-like) 301 592 IPR011009 -
Pumo1g01923 620 Gene3D Phosphorylase Kinase; domain 1 305 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01923 Pumo-Chr1 40594076 40602248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01923 9 620 Receptor kinase-like Gene Family AT3G21630 59.259 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo1g01923 PK_Tyr_Ser-Thr 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01923 K13429 - gmx:100777781 1040.8