Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01897 ATGTGGATAATCACATCACAGAATTTAAACCAAACATGTGTTCAGGATAAAGATAGAAAGAAGAGACCTACTGCGGTTGTACATGACAAGAAACAAGACAATATTGCTGATGAGAAAAGGGATTCTAACATGGTGGAAGTTCAAACTCTTCATGAGAAGCTTGATGCCCTGAAAGTTGTTTCTGATGTGTCTGATCCTGTGAATGGGATCGGTGAAAGCAGTTCAGTAATGGATGACAGTTCTTCAATATGTTCCACTGATTCATTGCCATCAATGGTGATGAATGACCATTTCAAAGTTCAAAAGTCACCTAGTAGTTGGACAACTGAAATGGATAGTCAACAATCCGATTCTACTGCAGATGTTGTTGATGTTAATGAGTCTGGAAGTGGAAAGTTAGGTGAATCTCAGCCTGAGGATCCTGTTCATGTCAAGAAAACATCCTTTGGTGCCTCACAATTGACTGATAAAGAGGCATCTTCATCTTTAACTTCTGTATCACAAGTTCAAGACTTGCCCAAAGGATTGGAAAGAGAAAATAGAATCATTCAAACAATCATGAGGCAGATCTTATTTGCACTGGATGCTCTTCACTCTACTGGTATTGTGCATAGGGATATTAAGCCACAGAACATTATTTTCTCTGAAGGGGATCAGAGTCTCGTACATTCAAAATCATTGATCTTGAAGCCGCTACAGACCTGTGAATTGGCATCAACTACTTTCCTAAGGAGTTTCTTTTTTATCCAAGGGTTGAGAACAGGACACTATAATGCTGCTATAGCGCATGGCAGAGCGGAGTGGCCCCTGGCCGTGACAATAACAGAGAAGAAATTACATAACTTGCTTCTGTGGAGAAGGCACAAAATATCCAAATCAACCATTGGCGGCAAGATTTCACCTTCTGAACCTGATGGTCCCAAAATAGTGAATTGGACAAAAATTGACCAAGATGTCTTCACAACCAATCGTAGCATGCCAGGTTGGTGTAATGTGGACCCAGCTGAAGCATATGCTGGCAAGGTGAAAATTAAAGAAGAATGTGATTGCAAACATGATGATCTTGCGGCCCAACTTTGTGAAGTGCCTATGGAATCTGTTTGCATTAATCAATGCTCTGGACATGGCCACTGTCGTGGTGGATTTCAGTGGCTCCTCTACCCTAAATCAGATGACTCAGCAGTTCTCACATGCAACAAACAGAAGATACTTCCCTATTCAAATGAATTGCTCGATCGAGAATTTTAG 1248 0.4087 MWIITSQNLNQTCVQDKDRKKRPTAVVHDKKQDNIADEKRDSNMVEVQTLHEKLDALKVVSDVSDPVNGIGESSSVMDDSSSICSTDSLPSMVMNDHFKVQKSPSSWTTEMDSQQSDSTADVVDVNESGSGKLGESQPEDPVHVKKTSFGASQLTDKEASSSLTSVSQVQDLPKGLERENRIIQTIMRQILFALDALHSTGIVHRDIKPQNIIFSEGDQSLVHSKSLILKPLQTCELASTTFLRSFFFIQGLRTGHYNAAIAHGRAEWPLAVTITEKKLHNLLLWRRHKISKSTIGGKISPSEPDGPKIVNWTKIDQDVFTTNRSMPGWCNVDPAEAYAGKVKIKEECDCKHDDLAAQLCEVPMESVCINQCSGHGHCRGGFQWLLYPKSDDSAVLTCNKQKILPYSNELLDREF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01897 415 MobiDBLite consensus disorder prediction 103 133 - -
Pumo1g01897 415 Pfam Protein kinase domain 179 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01897 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pumo1g01897 415 MobiDBLite consensus disorder prediction 103 143 - -
Pumo1g01897 415 Gene3D Transferase(Phosphotransferase) domain 1 144 230 - -
Pumo1g01897 415 SUPERFAMILY Protein kinase-like (PK-like) 181 217 IPR011009 -
Pumo1g01897 415 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 166 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01897 Pumo-Chr1 39735027 39739259 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Pumo1g01897 Pkinase 5.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01897 - - gmx:100783624 172.555