Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01880 ATGGGTCATGCCCATTTTCTTTTGTTGTCAAATCTTCAAGGCTTTTGGCCTTCTTTGATTGTTATAATCACTTGCTTTATCATTATGATCAAAACCCTAAGATACAACTTCATTGAGAATTATTTCAACAAACAAAAACCAAAACTCCCCCCAGGCCCTAAACCATGGCCTATAGTTGGAAACCTTCCTGAAATGCTTGTTAACAAACCTGCATATCAGTGGATACACAAGCTCATGAAAGAAATGAACACCGAAATTGCATGTATCCACCTAGGAAATGCCTATGTTATCCCAGTGACATGTCCCACCATTGCCAGTGAATTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGATCACAAAGCATGTCCACTGATCTCATCAGTAGTGGATATTCAACCACAATTTTTGGGCCCTTTGGGGACCAGTGGAAGAAAATGAAGAAGATCTTAACCAATAACTTGCTTTCCCCACACAAGCACCTATTGCTCCATGACAAAAGGACCGAAGAAGCTGACAACCTTATGTTTTACGTCTACAACAAATGCAAAAATGTGAACGATGGTGTTGGTGGCCTTGTGAATATCAGGAGTGCTGCAAGGCATTATTGTGGTAACCTAACCAGGAAAATTATTTTCAATACAAGGTATTTTGGGAAGGGTAGAGAGGATGGAGGGCCTGGTTTTGAGGAAGTAGAACATGTTGATTCCATCTTCGATTTACTCAAGTATGTTTATGCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGCACTTGACTTGGATAGCCAGGAGAAGAAAGTGAAGGAAGCTTTGAGGATCATCAAGAAGTATCATGATCCCATTGTTCAAGACAGAATTAAACAATGGAATGATGGACTAAAGGTTGATGATGAAGAGGACTGGCTTGATACTCTTATCTCCCTGAAAGATGCCAGCAATAACCCATCATTGACAATTGAGGAAATCAGTGCACAAATTATAGAATTGCTCATTGCAACATTGGACAATCCATCAAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCTGAGTTGCTCCATCGAGCCATTGAAGAATTGGACAGTGTGGTAGGGAAAGAGAGGTTGGTCCAAGAATCAGATATACCTAAGCTCAACTATTCCTGCGCAGCTGTTGTCTATGAAGCATGGGAGCAGATTGCAGATCCTACTATCTCGATCACCAACAATCACGGCGATGAGGCAACACGGAGGTCCATCCAAAAATCCGGGATTGTAACGTTGCTCCGACGATCTCACTCTCTTTTCCCCTTCCTCTTGTCCCACGACCCTCAGCTTTCCCAATTTCACACTTTCCCCCTCCTCTCCAAACGTAGATGA 1371 0.4179 MGHAHFLLLSNLQGFWPSLIVIITCFIIMIKTLRYNFIENYFNKQKPKLPPGPKPWPIVGNLPEMLVNKPAYQWIHKLMKEMNTEIACIHLGNAYVIPVTCPTIASEFLRKQDATFASRSQSMSTDLISSGYSTTIFGPFGDQWKKMKKILTNNLLSPHKHLLLHDKRTEEADNLMFYVYNKCKNVNDGVGGLVNIRSAARHYCGNLTRKIIFNTRYFGKGREDGGPGFEEVEHVDSIFDLLKYVYAFSVSDYMPCLRALDLDSQEKKVKEALRIIKKYHDPIVQDRIKQWNDGLKVDDEEDWLDTLISLKDASNNPSLTIEEISAQIIELLIATLDNPSNAFEWALAEMINQPELLHRAIEELDSVVGKERLVQESDIPKLNYSCAAVVYEAWEQIADPTISITNNHGDEATRRSIQKSGIVTLLRRSHSLFPFLLSHDPQLSQFHTFPLLSKRR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01880 456 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01880 456 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01880 456 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01880 456 PRINTS E-class P450 group I signature 420 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01880 456 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01880 456 Pfam Cytochrome P450 50 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01880 456 Gene3D Cytochrome P450 39 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01880 456 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 19 386 - -
Pumo1g01880 456 SUPERFAMILY Cytochrome P450 43 389 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01880 Pumo-Chr1 37644996 37647825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01880 8 394 Cytochrome P450 AT4G39950 50.773 3.78e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01880 - K14984 gmx:100809902 687.952