Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01879 ATGGTGGCCAATTTCTTCATCCCTAAGGGTAGCCATGTAATGCTAAGCAGACAAGAGCTTGGGAGAAACCCAAAAGTGTGGAATGAACCCTTCGAGTTCAAACCAGAACGCCACCTTAAGAGTGATGGGTCTGAAGTAGTTTTGACAGAGCCAAATTTGAAGTTCATATCATTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTGATGCTTGGCACCACAATGACTGTGATGCTATTTGCTAGGTTGCTCCATGGATTCACTTGGAGTGCACCACCCAATGTTTCAACAATCAACCTTGCTGAGTCAAATGATGATATTCTTCTTGCACAGCCACTTGTGGCAGTTGCTAAGCCAAGATTGGCACCAGAACTATATCTCCATTTAATGAACTGA 393 0.4453 MVANFFIPKGSHVMLSRQELGRNPKVWNEPFEFKPERHLKSDGSEVVLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWSAPPNVSTINLAESNDDILLAQPLVAVAKPRLAPELYLHLMN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01879 130 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 58 67 IPR017972 GO:0005506|GO:0016705
Pumo1g01879 130 Gene3D Cytochrome P450 1 123 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01879 130 Pfam Cytochrome P450 2 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01879 130 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 2 125 - -
Pumo1g01879 130 PRINTS E-class P450 group I signature 16 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01879 130 PRINTS E-class P450 group I signature 65 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01879 130 PRINTS E-class P450 group I signature 55 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01879 130 SUPERFAMILY Cytochrome P450 2 119 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01879 Pumo-Chr1 37644312 37644704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01879 2 125 Cytochrome P450 AT1G79370 53.600 1.05e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01879 - - gmx:100785254 238.81