Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01874 ATGGCTATGATGTCAAGGCCTTCTTGTGCTCCACTTGTTGCTGATGTGGCACATTCAGTTATGTTTTCTGCTGTTCAAGACTTGCCCAAAGGATTGGAAAGAGAAAATAGAATCATTCAAACAATCATGAGGCAGATCTTATTTGCACTGGATGCTCTTCACTCTACTGGTATTGTGCATAGGGATATTAAGCCACGGAACATTATTTTCTCTGAAGGGTTGAGAATAGGACACTATAATGCTGCTATAGCGCATGGCAGAGCGGAGTGGCCCCTGGCCGTGACAATCATGCCAGGTTGGTGTAATGTGGACCCAGCTGAAGCATATGCTGGCAAGGTGAAAATTAAAGAAGAATGTGATTGCAAACATGATGGTCTTGCGGCCCAACTTTGTGAAGTGCCTATGGAATCTGTTTGCATTAATCAATGCTCTGGATTTGTTGTCTTACTTGTTTACTGGAAGGAAAACTTTGTCAATCATCTATTATTTTCATTTTCTAGTTGTAAGGATTGA 513 0.4152 MAMMSRPSCAPLVADVAHSVMFSAVQDLPKGLERENRIIQTIMRQILFALDALHSTGIVHRDIKPRNIIFSEGLRIGHYNAAIAHGRAEWPLAVTIMPGWCNVDPAEAYAGKVKIKEECDCKHDGLAAQLCEVPMESVCINQCSGFVVLLVYWKENFVNHLLFSFSSCKD 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01874 170 Gene3D Transferase(Phosphotransferase) domain 1 17 108 - -
Pumo1g01874 170 Pfam Protein kinase domain 34 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01874 170 SUPERFAMILY Protein kinase-like (PK-like) 37 74 IPR011009 -
Pumo1g01874 170 ProSitePatterns Serine/Threonine protein kinases active-site signature. 58 70 IPR008271 GO:0004672|GO:0006468
Pumo1g01874 170 ProSiteProfiles Protein kinase domain profile. 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g01874 170 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 19 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01874 Pumo-Chr1 37306558 37309147 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Pumo1g01874 Pkinase 1.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01874 - - gmx:100783624 102.449