Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01861 ATGGGTGGCATAGGTAAAACCACCCTTGCTACTACTTTATATGACAAACTGTCTGATAAGTTTGAAGGTCGTTGCTTCCTTGCAGATGTAAGGGAAAAATCAGACAAGCTCAAAGCTTTACGTGATGAACTTTTTTCTAAGTTGCTTGGCAATAAAAATCATAGTTTTGATAATTCTGAGATGAGTAGGCTTCTTCAAAGAAAAAAAGTTTTCATTGTGCTGGATGATGTGGATACCTCAGAGCAATTAGAAAAACTAATCTACGAATACAAATTCTTAGGACCAGGAAGTAGAGTCATTGTTACAACTAGAAATAAGCAAATACTTAGCCCAGTTGATGAAATATATCCAGTCCAGGATTTGGGCTCTCATCACTCGCTTCAGCTTTTCTGTTTGACTGCTTTTGGAGAAAAACAACCTAAAGATGGATATGAATATCTATCAAGAAGAGTGATTTCCTATTGCAAAGGTATTCCTTTGGCTGTAAAAGTTCTGGGTGCAAGTCTACGTTCAAGAAGTAAAGAAGCCTGGGAATGTGAATTGGGGAAACTTCAAAAGATTCCAAATATGGAAATTCACAAGGTATTAAAATTAAGTTATGATGGCTTAGATCGTTCTCAGCAAGACATATTTCTAGACATTGCATGCTTCCTCAAAGGAGAAACTAGACATTATGTAACAAATGTATTGGAAGCTTTTGATGATTTCTTTCCAGCATCTGGGATAGAAGTCCTTTTAGATAAAGCTCTCATAACAATTTCATATGGCAATCGGATAGAAATGCATGACTTGATACAGGAAATGGGTCAGGAAATTGTTCATCAAGAATGTATCAAAGACCCTGGAAGACGAAGTCGGCTGTGGAGGCATGGGGAGGTGCTTGATGTACTAAAATATAAAAGGGGAACTGATGTTGTTGAAGGCATAATTTTAGATTTAGATACATTAACTGAGGATCTATATTTGAGCTCCAGTTCCCTTGCAAAGATGACTAAGCTCAGATTTCTTCAAATCTATAGAAGGTACAACTGGAGAGAGAACTTTAAAGTGTACCTTCCTAATGGTCTCGATTCATTGTCTGATGAATTGAGGTACCTTCACTGGGATAGCTTCGCTCTTGAGTCTTTGCCAGCTAAATTTTGTGCTGAACAACTTGTAATGCTTCACATGCCTCACAGCAAGCTCAAAAAGCTTTGGGACGGGGTTCAGAATCTTGTGAATTTAAAGACAATTAACCTTTATGGATCACGAGACCTGGTTGAGATCCCAGACTTATCTAAGGCAGAACAACTTGAAATTGTTTGTCTTGATGAATGTGAAAACTTGCATCAGTTCCATCCATCCAAGTTATCTTTCCCCAAGCTTACATGTGTGGATTTAAGTGGCTGCAGAGAGATTGAAAGCATCAATGTTCATTCAAAATCTCTCAGTGAAATTCTTGTCTCTGGTTGTTTATCTATGAAGGAATTCTCAGTGACATCAGAGAGAATGACAAAATTAGACTTATCTCACACTACTATACATGCATTGTCGTCATCAATGTTATCTCTCCCCAAGCTTGCATATTTGAATTTAAGTCACTGCAAAGAGATTGAGAGCCTTGATGTTGATTCAAAATCTCTCTGTGTACTGGAACTCACCGGTTGTTCATCTCTCAAGGAATTATCAGTGACATCAGAGGCAATGACAAAATTATACTTATCTGGCACTGCTATAAGTGCATTGCCGTCATCTCTCCTCAAGCTTACCGATTTGGATTTGAGAAGATGCACAAATATAGAAATCCTTAATCTTCATTTGGAATCTCTTCGTGTATTGAGACTCAATGGTTGTTCATCTCTCATGGAAATCTCATTAACATCAGAGGAAATTACAGAATTGGACTTATCTCACACCGATATACGTGCATTGATGTCATCAATGTTATCTCTCCCAAAGCTTACAAATTTGTGTTTAAATGGTTGCAAAAAGATTCAGAGGGTTGATGTTCATTCAAAATCTCTCTGCAAACTTGTTCTTTATGGTTGCTCATCTCTCAAGGAAGTCTCAGTGACATCTGAGGAAATAACTAAATTGGACATATTTGACTGCAGAGAGGTTGAAAGCCTAATTGTTCATACGAAATCTCTCTGTGTACTTAATCTTAGTGGTTTATCATCTCTAAGGGAGATCACAGTGACATCAGAGAAAATGCGGATTTTGAAGTTATCTCACACAGCTATACGTGCATTGCCGTCATCAATTGGTGACTTATTGTCTATAACAGTGTTAGACCTAAGTGGAACTAATGTTGAGATCTTACCTACACACGTCAAAAACCTTTCAATGTTGAGAGAGCTTTGGTTAAACGATTGCAAGAAACTCATGTCTCTGTCAGAGCTTCCACCATCCCTGGAAGAGCTTTGGTTAAATGATTGCAGGAAACTCGTTTGTTTGTCGAAGCTTCCACTTACCATGTCTGAGGTGAGCGCCATGAACTGCATTGCTCTGGGGACAGAGATGACTCAAAGGTTAGTGTTACAACACATGTTACAGAGCCGCATACCCTACTTACACCAACAATATCTTAATAATCCTAAGTATAGTGACGGTGGGTATTTCATGTTCCCGGGAGACTATGTCACGAACAGCGAGTGTGGGTTTCATACAACAGAGAGATCAACAACTGTTCCTTATCTTCCAAAATCGCACCTGTGTGGTTTCATTTGTTATTGCATCATTCTTTTTGAGGGACAACATTTAGATGAGGGTTGGCAAGATTTTGTTTCGGTTTATATCCATCAAGATGACATAAAGCTCTGCTGCGAAATCATCCATATAAAATGCAATAGAAGTTTAATTTCAAAACACGTGCTCTTTTCATATGTTGATGTCAGCCAATTTGACAGAATAAGTGAGGTGTATGATCATTTCAACAACATAACATTCAAATTTGAAATGACATTATTTAAAGAGAAAATAAAAGGGTGCGGGGTCTTCCCAGTATATACCACAGCATCGGGGTTGAAGTTGGAGAGTAGTAGCAAGGAAATTGAAATTGGAATTAGAGGCTCTGATAATGAAAATGAACAAGACCCGGAACAACCTCTTCCCGCAACCTAG 3102 0.382 MGGIGKTTLATTLYDKLSDKFEGRCFLADVREKSDKLKALRDELFSKLLGNKNHSFDNSEMSRLLQRKKVFIVLDDVDTSEQLEKLIYEYKFLGPGSRVIVTTRNKQILSPVDEIYPVQDLGSHHSLQLFCLTAFGEKQPKDGYEYLSRRVISYCKGIPLAVKVLGASLRSRSKEAWECELGKLQKIPNMEIHKVLKLSYDGLDRSQQDIFLDIACFLKGETRHYVTNVLEAFDDFFPASGIEVLLDKALITISYGNRIEMHDLIQEMGQEIVHQECIKDPGRRSRLWRHGEVLDVLKYKRGTDVVEGIILDLDTLTEDLYLSSSSLAKMTKLRFLQIYRRYNWRENFKVYLPNGLDSLSDELRYLHWDSFALESLPAKFCAEQLVMLHMPHSKLKKLWDGVQNLVNLKTINLYGSRDLVEIPDLSKAEQLEIVCLDECENLHQFHPSKLSFPKLTCVDLSGCREIESINVHSKSLSEILVSGCLSMKEFSVTSERMTKLDLSHTTIHALSSSMLSLPKLAYLNLSHCKEIESLDVDSKSLCVLELTGCSSLKELSVTSEAMTKLYLSGTAISALPSSLLKLTDLDLRRCTNIEILNLHLESLRVLRLNGCSSLMEISLTSEEITELDLSHTDIRALMSSMLSLPKLTNLCLNGCKKIQRVDVHSKSLCKLVLYGCSSLKEVSVTSEEITKLDIFDCREVESLIVHTKSLCVLNLSGLSSLREITVTSEKMRILKLSHTAIRALPSSIGDLLSITVLDLSGTNVEILPTHVKNLSMLRELWLNDCKKLMSLSELPPSLEELWLNDCRKLVCLSKLPLTMSEVSAMNCIALGTEMTQRLVLQHMLQSRIPYLHQQYLNNPKYSDGGYFMFPGDYVTNSECGFHTTERSTTVPYLPKSHLCGFICYCIILFEGQHLDEGWQDFVSVYIHQDDIKLCCEIIHIKCNRSLISKHVLFSYVDVSQFDRISEVYDHFNNITFKFEMTLFKEKIKGCGVFPVYTTASGLKLESSSKEIEIGIRGSDNENEQDPEQPLPAT 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01861 1033 Gene3D Ribonuclease Inhibitor 704 846 IPR032675 -
Pumo1g01861 1033 Gene3D Ribonuclease Inhibitor 309 494 IPR032675 -
Pumo1g01861 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 534 IPR044974 GO:0006952
Pumo1g01861 1033 PRINTS Disease resistance protein signature 155 169 - -
Pumo1g01861 1033 PRINTS Disease resistance protein signature 64 78 - -
Pumo1g01861 1033 PRINTS Disease resistance protein signature 598 614 - -
Pumo1g01861 1033 Pfam Leucine Rich Repeat 385 403 IPR011713 -
Pumo1g01861 1033 Gene3D - 1 115 IPR027417 -
Pumo1g01861 1033 Gene3D Ribonuclease Inhibitor 495 703 IPR032675 -
Pumo1g01861 1033 Gene3D - 121 204 IPR042197 -
Pumo1g01861 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 214 IPR027417 -
Pumo1g01861 1033 FunFam Disease resistance protein (TIR-NBS-LRR class) 122 204 - -
Pumo1g01861 1033 SUPERFAMILY L domain-like 261 796 - -
Pumo1g01861 1033 MobiDBLite consensus disorder prediction 1013 1033 - -
Pumo1g01861 1033 Pfam NB-ARC domain 1 198 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01861 Pumo-Chr1 36289306 36308400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01861 1 605 WRKY Transcription Factor Family AT5G45050 33.740 1.14e-84 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01861 - - ccaj:109806118 864.374