Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01858 ATGGATATGAAGATCTATCAAGAAGAGCGATTTCATATTGCAAAGGGTATATTTTTGGATATTGCACGCTTTTTCAGAGGACAAGAAGAAGGTCATGTAACAAGTCTACTAGAAGCTTTTGGTTTCTTTGTAGCAACAGGGATAGAAGTCCTTTTAGATAAAGCTCTCATAACAATTTCAGATGGTTATGTAGAAATGCATGACTTCATACAAGAAATGGGTCGGGAGATTGTTCATCAAGAATGTATCAAAGACCCTGGAAGACGAAGTCGGTTGTGGAAACCTGAGGAAGTTCAAGATGTATTAAAGTATAACAAGGGAACTGATGTTGTTGAAGGCATAATTTTAGATTTATCAAAATTAACTGGGGATCTATATTTGAGCTCTGATTCCCTTGCAAGGATGCCTAACGTGAGATATCTTAAAATCCATAATGCTTACAGGAGTAACAGATATAATGTGTACCTTCCTGATGGTCTAGAGTCATTGCCTTATAAATGGAGGTACCTACTTTGGGATGGATTCTGTCTTGAGTATTTTCTGTCTAACTTTTGTGCTAAACAAATTGTAGAGCTTCGCATGCCTGGTAACAGGCTTAAAAAGCTTTGGGATGGGGTTCAGAATCTTGAAAATTTAAAGGCAATTGATTTTAGTCGCTCCAGACACCTGATTGAGATCCCAGACTTGTCTAAGGCAGAAAAACTAGAAAATGTTTATCTTAGTTTTTGTGAAAGCTTGCGTCAGCTCCATGTTCCTTCAAAATCTCTCCGAATATTACACCTCAACAGTTGTTCATCTCTCAAGGAAATCTCAGTGACATCGGAGGAAACGACAGAATTGAACTTAGCTGACACTCCTATATGTGCATTGCCATCATCAATTTCGCATAATAGGAAACTTGCTTTTCTTTATCTAAATGGTTGCAACAATCTCAACTTTGCTGGGAACAAGTTGTCAGATGATCCGGGAATAGGCCACTTATGGTCTTTACAAGTGTTAGACCTACGTGGAACTAATGTTGAAAGCTTACCTGCAAACATCACAAACCTTTCAATGCTGAGAAGGCTTGCGTTGGACAATTGCACGAGCCTCGTGTCTCTGCCGGAGCTTCCACCGTCCCTTGAACAGTTGATGGCCTTGAACTGCACTTCTCTGGAAACAGACTTCACTCAATGGCTAGTGTTACAACACATGTTCCAGAGTCGCATACCTTACTTACACAAACACCATCTTAATCCTAGGTATTATGATGGGGAGTATTTCTTCATCCCGGGAGACCGTGTCACCAACGAGTGTGGGTTTTGTACAGCAGAAAGTTCAATAACTATTTCTTGTCTCCCACAATCTGGCTTGCGCGGATTCATTTATTGCGTCATTCTTTCTAAGGGATCATACAAAGGTTATGTTTCATGCTCTATCTCCCAAGATGGCATTCGGATCGGCGGGGATGGCAAGTCTATACACTGCACAAATCTAATTTCAGATCACGTGTTATTTTTTTTGTATTGTAATGTCAGCAAATTTCACCGCACAAGTGAAGTGTACGACCATTTCAGCCACATACCATTTAAATTTGAATTTGCTTACTGTGATAACAAGTATGTACTCGAACAAGAGAGGATTAAAGGGTGTGCGGTCTTCCCAGTATGTTTCTCAGCATCGGGGTTGAAGTTGGCCAGTAGTAGTAGCAAGGAAATTTTTGAAGTTCGAGTTGGAGGCTCTAATAATGAAAATGAAGATGATTGGAAGCTACCTTGTCGGTAA 1764 0.4002 MDMKIYQEERFHIAKGIFLDIARFFRGQEEGHVTSLLEAFGFFVATGIEVLLDKALITISDGYVEMHDFIQEMGREIVHQECIKDPGRRSRLWKPEEVQDVLKYNKGTDVVEGIILDLSKLTGDLYLSSDSLARMPNVRYLKIHNAYRSNRYNVYLPDGLESLPYKWRYLLWDGFCLEYFLSNFCAKQIVELRMPGNRLKKLWDGVQNLENLKAIDFSRSRHLIEIPDLSKAEKLENVYLSFCESLRQLHVPSKSLRILHLNSCSSLKEISVTSEETTELNLADTPICALPSSISHNRKLAFLYLNGCNNLNFAGNKLSDDPGIGHLWSLQVLDLRGTNVESLPANITNLSMLRRLALDNCTSLVSLPELPPSLEQLMALNCTSLETDFTQWLVLQHMFQSRIPYLHKHHLNPRYYDGEYFFIPGDRVTNECGFCTAESSITISCLPQSGLRGFIYCVILSKGSYKGYVSCSISQDGIRIGGDGKSIHCTNLISDHVLFFLYCNVSKFHRTSEVYDHFSHIPFKFEFAYCDNKYVLEQERIKGCAVFPVCFSASGLKLASSSSKEIFEVRVGGSNNENEDDWKLPCR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01858 587 SUPERFAMILY L domain-like 66 386 - -
Pumo1g01858 587 Gene3D Ribonuclease Inhibitor 278 412 IPR032675 -
Pumo1g01858 587 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 384 IPR044974 GO:0006952
Pumo1g01858 587 Pfam Leucine Rich Repeat 190 207 IPR011713 -
Pumo1g01858 587 Gene3D Ribonuclease Inhibitor 102 277 IPR032675 -
Pumo1g01858 587 SUPERFAMILY "Winged helix" DNA-binding domain 15 103 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01858 Pumo-Chr1 36120942 36123085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01858 15 387 WRKY Transcription Factor Family AT5G45050 34.848 3.59e-53 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01858 - - gmx:100809480 594.349