Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01850 ATGGTGCACTTGGCAATTGATTTAGAGGTCCGACTTGCAATAGAGTACATTCTGATTCTTGGTGGAGAACCTGTAGAACTTCTTCCTAGATGTTCTGAAATTATTGCCCGGCAACTTGAACTTGTTCAAAGTTATCAGTTGGCTGCTGAAAAGTCAGCTGAGAAACTCAGACAGATGGAAGAACTACGCAGGGAGAAAGAGGCAACAAGGATGAAAGCTGGCAATGAGAGAACCATTGCTCGCAAAATTGCCAAAGAATCATTGGCTTTGACAACTTTCTTAATTCGCAAGTTCAAGCATATTCTTCTTCCTATAGCTGCTGCCTGTGTTGCAAAGGAGCAACAAGAACATGTAGATTTTGAATCATTCTTTACCCATACAATTTGCCATGAATGCTGCCAAGGAATTGGACCACATACCATAACACTTCTAAATGGCCAAAAGTCTACTGTCAGATTGGTCAGTTCCACAATATACTTCACTTGA 486 0.4095 MVHLAIDLEVRLAIEYILILGGEPVELLPRCSEIIARQLELVQSYQLAAEKSAEKLRQMEELRREKEATRMKAGNERTIARKIAKESLALTTFLIRKFKHILLPIAAACVAKEQQEHVDFESFFTHTICHECCQGIGPHTITLLNGQKSTVRLVSSTIYFT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01850 161 Coils Coil 42 76 - -
Pumo1g01850 161 PANTHER DIPEPTIDYL PEPTIDASE III-RELATED 93 153 IPR039461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01850 Pumo-Chr1 35214352 35216555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01850 37 123 Homeobox Transcription Factor Family AT5G44180 41.379 1.73e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01850 - - ccaj:109811981 120.553