Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01844 ATGGCCCTTGCTATGGTGGGAGAGGCACTCATCTCTGCTTCTGTGGAGTTCTTAATAAAAAGGATAGCTTCAACAGAGTTTCGAGATTTCTCCTCCAGCAGAAAGCTGAATGTTTCTTTGTTGGATGAGTTGAAGATAAAGCTGTTGGCACTTAACGCTGTGCTCAATGATGCTGAGGAGAAGCAGATCACTAATCTTGCAGTGAAGGAATGGCTTGATGAGTTGAAAGATGCTGTCTTAGATGCTGAAGATTTGTTGGATGAAATCAACACAGATGCTTTGAGATGCAAGGTGGAGGGAGAATCTAAAACATTTACTACCAAGGTCAGATCATTACTTTCTTCTCGTGTTAAAAAATTCTATAGGAGTATGAATTCAAAGCTTGAAGCAATATCTGGAAGGCTAGAACATTTTGTGAAACAGAAAGATATTCTTGGTTTGCAAAGTGTTTCTAGGAAAGTCTCTCACCGAACAGTTTCAGATTCATTGGTTGAATCTGTTGTTGTTGCAAGGGAGGATGACAAAGAGAAGCTACTGAACATGCTTCTCTCTGATGAAGATGAGAAGAATAGTAACATAGAAGTGCTAACAATATTGGGCATGGGAGGTCTGGGAAAAACAACCTTAGCTCAATGCCTTTATAATGATAGTGCAGTGAAGAAACATTTTGATTTGACAACTTGGGCATGGGTATCTGATGATTTTGATGTGTTTAGGGTAACAAAGACACTTGTTGAATCTGTCACTTCTAAAAATTGTAATGGTACTAATTTTGATGCTCTTCGTGTTGAGTTGAAGAACAGCTTGAAAGATAAAAAGTTTTTGCTTGTGCTCGATGACCTTTGGAATGAGAAGTATAATGATTGGCATCACCTAATAGCACCTCTCAGCAGTGGGAAAAAGGGAAGTAAAATTATTGTGACAACCAGACAACAGAAAGTTGCACAAATGACACATACATTTCCCATTTATGAGCTGAAACATCTAACAGATGAAAATTGTTGGTGTATACTTGCTGAACATGCATTTGGAAATGAAGGTTACAACAAATATCCAATCCTAGAAGAAATTGGTAGGAAAATTGCAAGAAAATGCAATGGCCTACCTCTAGCTGCTAAAACGTTGGGAGGTCTTTTGCGATCAAATGTTGATGCAAAGGAATGGAATAGAATTCTGAACAACAACTTATGGGCACATGAAGAGGTTTTACCAGCTTTACGCATAAGTTATCTTCATCTCCCAGCACATTTGAAAAGATGTTTTGCTTATTGCTCAATTTTTCCCAAACAACATTTGTTGGATAGGAAGGAATTGATTCTGTTATGGATGGCTGAAGGCTTTCTTCAACAAATCCACGCAGAGAAAGCAATGGAATCAGCAGGTGATGACTACTTTAATGAATTATTATCTAGATCTTTAATTGAAAAAGACAAGACTCAAGTGGAGGATAAGTTTCGAATGCATGACCTCATCTATGATTTATCTAGACTTGTATCTGGAAAAAGTTCTTCCTACTTTGAAGGTGGTGAAATCCAAGGAACTGTTCGCCATCTAGCATTTCCTAGAAGAACTTATGGTGTCTCTAAAACATTTGAGGGTTTTTATGAGCTAAAGTTTTTGCGAACCTATTTACCACTATCTAAATATGGACCCTCTGAAAGTTATGTAACCAAAAAGGTGTCGCATGATTGGCTGCCAAAACTAAGATATTTGCGAACATTGACATTGTCTTCATACAAAAATATCAATGAGCTGCCTGATTCAATAAGCAATTTGGTTCTTTTGCGGTATCTTGACCTTTCCTATACTTCAATCAAAAGGTTGCCCGATGCAACCTTTAGGCTTTACAATTTGCAGACATTGAAATTATCAAATTGTAAATTTCTTACTCAGCTGCCTGAACAGATAGGAAATTTGATCAATTTACGCCACCTTGATATTAGAGACACGAATTTGTTGGCAATGCCTGCACAAATATGCAAGCTACAAGATCTCCGTGTGTTGACTTCTTTTGTTGTAGGCAGAGAAGATGGAGTAACTATCGGAGAATTAAGAAAATTTCCTTACTTGCAAGGCATGCTTTCCATTTTGAAGCTACAAAATGTTGTTGATCCCATGGATGCATTTCGAGCTGACTTAAAGAAAAAAGAGCTCATTGAGGAGCTTATGCTGGAATGGGACAATGACCGAGAAGATTCACCAATTGAGAAAGATGTACTTGAGAACCTGCTACCATCAACAAATTTAAAGAAGCTCGGCATCAGATACTACAGTGGCACATGCTTTCCAAAATGGCTGGGTGACTCTTCATATTCTAATGTTACAGTCCTTTGCATCAGTGATTGCAACTATTGCTTTTCACTTCCATCATTTGGACAATTACCTTCTCTTAAGGAGCTTGTGATTAAAAGGATGAAAATGGTCAAGACAGTTGGTGACGAATTCTATTGCAACAGTGGAGGTTCCCTTTCATTTCAGCCATTTCCTTTGTTGGAGAGTATCCAGTTTGGAGAGATGTCAGAGTGGGAGGAGTGGCTACCATTTGAAGGTGAAGGCATCAAATTTCCTTTTCCTTTCCTTAAGCGTTTGAGTATATGGAAGTGCCCCAAGTTGAGAGGAAACCTGCCCAACCATCTACCTTCATTGACAGCGGTTAGTATATCAGAGTGCAACCAGCTAGAGGCAAAATCATGTGATCTGCACTGGAACACATCAATTGAATCAGTACATATTAGTGAAGGGGGAGAAGGCTTGTTCTCCTTACTTGACAACTTTACTTATAGGATACTACGCATTGGAAAGTGTGACAGCTTGTCATCTTTGCCAAGAATGATACTAGCTGCCAATTGTCTTCAAAGGTTGATTCTTGAAGATATCTCCACTTTGATTTCCTTCCCAGCTGATGGTTTGCCAACGTCATTGCAATCACTTGAGATTTACGACTGTGGGAACTTAGAATTTCTGTCTTCCGAATCATGGCACAGATACACATCACTTGAATCTCTGACCATTGGGAGAAGCTGTCATACCCTGGCGTCCTTTCCATTAGATTGTTTCCCTTCCCTACAATTTCTGGATATTTGGGATTGTCCCAGCATGGAAGCAATTACTACTCAAGGTGGAACGGCTGCTCTCAAATTAGATTATCTTTGTGTCCGTGATTGTAAGAATCTTAGGTCACTTCCAGAACTGATTGATCTCCCTGCCCTTCAAGGGTTATTCCTTTACGGGCTTCCAGAGCTAACATCATTGTCCCCAAGGTGTTTTCCTTCCAGTTTACGAAGACTTGGCGTTGAAGTTGGAATGCTATCATGTATGTCTAAACATGAGTTAGGTTTCCTATTCCAACGCCTCACTTCTCTGTCTGATCTTGACATTCGGGGTTCTGGGGAGGAAGATGTTGTTAACACCCTGCTGAAAGAGTCGTCACTGCCCACTTCTCTCCAGCATCTGTACCTACGGAGTATTAATGGTTTGAAGTGTTTGGAAGGAAAAGGGCTTCAACATCTCACGTCTCTCACAAAGCTTGACATTTGGGATTGTAAAAGCCTTGAGTCGTTGCCAGAAGATCAGCTTCCATCCTCTCTTGAATTACTGAAGATAAGTCACTGTCCTTTACTAGAAGCAAGGTATCAAAGTCGGAAAGGGAAACACTGGTCTAAGATTGCTCACATTCCTGCCATCAAGATAAATGATGAAGTGATAATATGA 3711 0.3964 MALAMVGEALISASVEFLIKRIASTEFRDFSSSRKLNVSLLDELKIKLLALNAVLNDAEEKQITNLAVKEWLDELKDAVLDAEDLLDEINTDALRCKVEGESKTFTTKVRSLLSSRVKKFYRSMNSKLEAISGRLEHFVKQKDILGLQSVSRKVSHRTVSDSLVESVVVAREDDKEKLLNMLLSDEDEKNSNIEVLTILGMGGLGKTTLAQCLYNDSAVKKHFDLTTWAWVSDDFDVFRVTKTLVESVTSKNCNGTNFDALRVELKNSLKDKKFLLVLDDLWNEKYNDWHHLIAPLSSGKKGSKIIVTTRQQKVAQMTHTFPIYELKHLTDENCWCILAEHAFGNEGYNKYPILEEIGRKIARKCNGLPLAAKTLGGLLRSNVDAKEWNRILNNNLWAHEEVLPALRISYLHLPAHLKRCFAYCSIFPKQHLLDRKELILLWMAEGFLQQIHAEKAMESAGDDYFNELLSRSLIEKDKTQVEDKFRMHDLIYDLSRLVSGKSSSYFEGGEIQGTVRHLAFPRRTYGVSKTFEGFYELKFLRTYLPLSKYGPSESYVTKKVSHDWLPKLRYLRTLTLSSYKNINELPDSISNLVLLRYLDLSYTSIKRLPDATFRLYNLQTLKLSNCKFLTQLPEQIGNLINLRHLDIRDTNLLAMPAQICKLQDLRVLTSFVVGREDGVTIGELRKFPYLQGMLSILKLQNVVDPMDAFRADLKKKELIEELMLEWDNDREDSPIEKDVLENLLPSTNLKKLGIRYYSGTCFPKWLGDSSYSNVTVLCISDCNYCFSLPSFGQLPSLKELVIKRMKMVKTVGDEFYCNSGGSLSFQPFPLLESIQFGEMSEWEEWLPFEGEGIKFPFPFLKRLSIWKCPKLRGNLPNHLPSLTAVSISECNQLEAKSCDLHWNTSIESVHISEGGEGLFSLLDNFTYRILRIGKCDSLSSLPRMILAANCLQRLILEDISTLISFPADGLPTSLQSLEIYDCGNLEFLSSESWHRYTSLESLTIGRSCHTLASFPLDCFPSLQFLDIWDCPSMEAITTQGGTAALKLDYLCVRDCKNLRSLPELIDLPALQGLFLYGLPELTSLSPRCFPSSLRRLGVEVGMLSCMSKHELGFLFQRLTSLSDLDIRGSGEEDVVNTLLKESSLPTSLQHLYLRSINGLKCLEGKGLQHLTSLTKLDIWDCKSLESLPEDQLPSSLELLKISHCPLLEARYQSRKGKHWSKIAHIPAIKINDEVII 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01844 1236 Pfam NB-ARC domain 171 394 IPR002182 GO:0043531
Pumo1g01844 1236 Coils Coil 41 61 - -
Pumo1g01844 1236 Gene3D - 15 136 - -
Pumo1g01844 1236 PRINTS Disease resistance protein signature 365 379 - -
Pumo1g01844 1236 PRINTS Disease resistance protein signature 268 282 - -
Pumo1g01844 1236 PRINTS Disease resistance protein signature 613 629 - -
Pumo1g01844 1236 PRINTS Disease resistance protein signature 195 210 - -
Pumo1g01844 1236 Gene3D - 328 408 IPR042197 -
Pumo1g01844 1236 Gene3D Ribonuclease Inhibitor 928 1099 IPR032675 -
Pumo1g01844 1236 SMART LRR_typ_2 639 662 IPR003591 -
Pumo1g01844 1236 SMART LRR_typ_2 592 615 IPR003591 -
Pumo1g01844 1236 Gene3D Ribonuclease Inhibitor 1100 1231 IPR032675 -
Pumo1g01844 1236 Gene3D - 409 497 IPR036388 -
Pumo1g01844 1236 Gene3D - 148 321 IPR027417 -
Pumo1g01844 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 424 IPR027417 -
Pumo1g01844 1236 Pfam Rx N-terminal domain 15 104 IPR041118 -
Pumo1g01844 1236 SUPERFAMILY L domain-like 901 1222 - -
Pumo1g01844 1236 FunFam Probable disease resistance protein At1g63360 410 496 - -
Pumo1g01844 1236 FunFam Probable disease resistance protein At1g61300 150 320 - -
Pumo1g01844 1236 Coils Coil 68 92 - -
Pumo1g01844 1236 Gene3D Ribonuclease Inhibitor 540 921 IPR032675 -
Pumo1g01844 1236 SUPERFAMILY L domain-like 486 912 - -
Pumo1g01844 1236 PANTHER DISEASE RESISTANCE PROTEIN RP 43 873 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01844 Pumo-Chr1 34610241 34614026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01844 192 811 WRKY Transcription Factor Family AT5G45050 22.470 3.25e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01844 - - gmx:100800462 1830.45