Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01835 ATGGCTACTGAAAAGCTTGGATGTTGTGCAAAATTTTTTGCAAGCTCTAAACCCCACTTGGCCATGATCTCTTTACAATTTGGCTATGCTGGCATGAACATTATCACTAAGGTTTCCCTCAACCAAGGCATGAGCTACTATGTCCTAGTGGTTTATCGCCATGCCTTCGGCACCGCCGCCATCGCTCCTTTTGCCTTTATTTTGAAAGGTCAACCAAAGATAACATTCCCAGTTTTCATGCAAATTTTTATCCTAGCTCTTCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCCTTGACTTTTGTGATGGCAGTGTTTTGCTGGATGGAGAAGATAGACATAAAGAAGGTGAGATGCATAGCAAAGATAGTGGGAACATTAGTGACAGTGGCAGGGGCTATGCTGATGACATTATACAGAGGTCCAATAGTGGAGATGGTATGGGCCAAACATCCACATAATAAGACCAATGCAACAGCCACCACAGGATCATTGGACAAAGATTGGCTCTTAGGCTGCATCTTTCTCATCATTGCCACCCTTGCTTGGGCTTCCCTCTTTGTTTTACAAGCCAAAGCTATACAAACGTACAAGAATCATCAGCTAAGCCTAACTTCACTAGTGTGCTTTATAGGCACTCTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAATCCTTCTGTTTGGAGAATTAGCTGGGATATGAACTTACTTGCAGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTGGTAATTAAGAAGAAAGGGCCTGGCTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCATCATGGGGTCCTTTATCCTTGCAGAACAAAGTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTTATAGGTTTGTACTCAGTTCTGTGGGGAAAGCACAAAGAACAAATAGAGAGCAAAGTGGCAGATGAAATTCCCTTGCCTGTAAAGGATGCTCAAATTGCTGTAATTGCAGGGCCAATTATTGATGCCACTGATAATTTTACTGAAGAAAAATATGGTCAGAAAGGAGAAGCCAACAATAAGCTCTCTTCACTCGTAATAACTATGCCTATTCCAGAGCCTCCCACGAAAGCTAAGGCTTAA 1209 0.4235 MATEKLGCCAKFFASSKPHLAMISLQFGYAGMNIITKVSLNQGMSYYVLVVYRHAFGTAAIAPFAFILKGQPKITFPVFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPALTFVMAVFCWMEKIDIKKVRCIAKIVGTLVTVAGAMLMTLYRGPIVEMVWAKHPHNKTNATATTGSLDKDWLLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTLQAIAVTFVVEHNPSVWRISWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPGFATAFSPLMMIIVAIMGSFILAEQSYLGGVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLPVKDAQIAVIAGPIIDATDNFTEEKYGQKGEANNKLSSLVITMPIPEPPTKAKA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01835 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 158 - -
Pumo1g01835 402 Pfam EamA-like transporter family 20 156 IPR000620 GO:0016020
Pumo1g01835 402 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020
Pumo1g01835 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 335 - -
Pumo1g01835 402 PANTHER WAT1-RELATED PROTEIN 18 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01835 Pumo-Chr1 33846659 33849373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01835 1 399 Nodulin-like Gene Family AT5G07050 63.592 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01835 - - gmx:100804390 733.791