Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01830 ATGTCCACCATCACTGCTTCTTACAATGTCACTCCCAATGAGCCAACTCCAAACGTTTCTCTGTGGCTCTCCGAGAGTGACCAAGTGGCACGTTGGAGCCACACCTCCACCATCTACATCTACAAAGAAAATCAAAGCCAAAACGCCCTTGAGAGAATGAGAAACTCTCTAAGCAAAATTCTAGTGCACTACTACCCTGTAACCGGTCGATTGACTTGGATAGAGGGTGGTAGGTTAGCACTGAATTGCAATGCAAAGGGAGTGACATTGATCGAAGCTCAATCGCCGAAAACAATGGCGGAATACGGCGATTTTGCGCCGAACGAAAAATTGAAGAAAGAACTCATTCCCCCAATTGATTATTCTCAACCCATTGAGGAGTTTCCCTTGTTGCTTGTTCAATTAACAAGGTTCCAAGGTGGAGGAAGCAACCAAGGGCTTGCAATTGGGGTGGCTTTTTCCCATGTTTTGTGTGATGGGTTAGCAGCCGTTCGATTCATCAACACATGGGCAAAGCTTACTAGAGGGGAAGTGTTGGACTCAATTGAAATGTTTCCTTTTCTTGATAGAACAATTATCAACTCCACATACCCACCAAGGCCTCCACGTTTTGATCACCCGGAGTTGAAGCCTCTCCCTCTCAAACTAGGCAGCACTGACACCAAAGAAGAACAGAAGAAGGAGAAAAGTGCTGTGATTTTGAGACTCACGTCACAGCAAGTGGAGAAATTGAAGAAGAAAACCAATGATGAACGACCTCAAAAAGAAGAAATGTTCCGACCATATAGCAGATACGAAGTCATTGCATCACACATATGGAGATGTGCAACAAAGGCACGCGAGCTAGAAGATCTTCAACCAACCGTGGTAAGGGTCAGCGCCGACATCCGCAACAGGCTGAACCCTCCGCTCCCAAGGAACTACTTCGGCAACGCGCTGGCCGTGGCACTGACTCCGCCGTGCCGCGCATCAGAACTCATAACTAACTCATTAGCCCACGGCGCCCGGAAGATCCGCGAAGCGACCGAGTCGCTCAACGACGAGTACATAAGGTCGCAACTCGACTTCATAAGGTGCCAGGAGAAGTTGGACTGGATTAGGGCATCGTACCTGGACCGAGGGGAGCCCCGAAACGCACCGTTTTACGGGAACCCTAATTTAACCATTGTGAGCTGGACGAGCATGCCGGTTTACGAGGCTGATTTTGGGTGGGGGAGGCCGGGGTATTTTGGTCCGGGTGCTGTGTACCCTGATGGCAAGGCTTACATTATTCGAAGCGCGGATGAAGATGGTTCACTCGTTGTGTCTGTGCATCTGCAAACGGCACACATGGAACTCTTCAAGAAGTTCTTCTATGAGGATATATGA 1368 0.4883 MSTITASYNVTPNEPTPNVSLWLSESDQVARWSHTSTIYIYKENQSQNALERMRNSLSKILVHYYPVTGRLTWIEGGRLALNCNAKGVTLIEAQSPKTMAEYGDFAPNEKLKKELIPPIDYSQPIEEFPLLLVQLTRFQGGGSNQGLAIGVAFSHVLCDGLAAVRFINTWAKLTRGEVLDSIEMFPFLDRTIINSTYPPRPPRFDHPELKPLPLKLGSTDTKEEQKKEKSAVILRLTSQQVEKLKKKTNDERPQKEEMFRPYSRYEVIASHIWRCATKARELEDLQPTVVRVSADIRNRLNPPLPRNYFGNALAVALTPPCRASELITNSLAHGARKIREATESLNDEYIRSQLDFIRCQEKLDWIRASYLDRGEPRNAPFYGNPNLTIVSWTSMPVYEADFGWGRPGYFGPGAVYPDGKAYIIRSADEDGSLVVSVHLQTAHMELFKKFFYEDI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01830 455 Pfam Transferase family 3 453 - -
Pumo1g01830 455 FunFam Tryptamine hydroxycinnamoyl transferase 216 452 - -
Pumo1g01830 455 MobiDBLite consensus disorder prediction 198 230 - -
Pumo1g01830 455 Gene3D - 215 453 IPR023213 -
Pumo1g01830 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 451 - -
Pumo1g01830 455 Gene3D - 3 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01830 Pumo-Chr1 33541752 33544133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01830 4 453 Monolignol Biosynthesis Gene Families AT5G48930 38.053 4.63e-101 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01830 K13065 - gmx:100787038 827.394