Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01828 ATGAATTTGAACCAAACAATCTTCTCTTCAGTCACGTTCCTGTATAACGTACCTGAAAAGAGACATGAGGTCTACAACGTGTGCATGGATCAGCCAATGAAGATAATATCTAATGGCATATGGACTCACCACAATGGAGCAATACCTTCAGAATCTGCATTCACAATGCTTGAGCTGCAAATAGTTACCATTTTCGCCGTCACGCAAAGCTTTCATTTCATTCTCAAGCGATTAGGGATCCCTTATTTCGTTTCACAAGTTATGGCTGGTTTTCTTCTAGGTCCATCAATTCCCACAGGACCATTTGAAAAGTACAAGAAGATGTTGTTCCCCTTTGGGAGTCCAGATATGGTGAGCACATTGTCATCGTTGGGGTACTCATTCTACCTCTTCATAAACTCAGTGCAAATGGACCTAAGCTTGATCACAAAAACGGGAAGGAAGGCTTGGGTCATCTCACTTTCCTCCTATTTCATTTCCGTAATGGTTGGCTTTGCCATCATGATCATGTTCATTCCCACGTGGGAACGCCTCCTCAATGAAGACATTGTCTCCATCTTGCCCGTGGTCATCATATCTCAAAGCGGTAGCTCCTTCGCCGTCGTCTCGGCCTTGCTCAATGACCTCGGAATCCTCAACTCCGAACTCGGACGCCTTGCGCTCTCCACATCTTTTGTCATCGATCTTACAGGTGGAATCATGACAGGATTTGGCGCTGACTTTGTGAGAAGCATAGATTTGGAATTTTCTGTCCGTGTTATAAACATGGTGGCATTTTTTGTTTACCTAATCCTTGTTCCACTAATTGGGCGTCCAGCAATGAGGTGGATTGTGAAGAACACCCCAGAAGGAAAACCAGTGGACAAGAAGTATATCTATGCCATCATAGTGGGTTTTTTGGGATTGGGTTTTTTTGCAGGGTATTTCAACCAACCCTTCTTGGTAGGGGCTGTTATCTTAGGCCTTGCTGTTCCTGAAGGTCCTCCTTTGGGGTCTGAATTGGTTACCCAACTTGAGTTGTTCTCCACGTGGTTTCTCTCCTCAATTTTTGTCACGTGTTGCATCATGAAGGTTGATCTTAAACAATGCAACTCTCTCTCCTTCACTGTGGTCGTATGCTTCTTCATCATAATGGCCCACTTGGTTAAGTCGCTAATGTGCATGGGAATTTGCCGCTACTGCAAAATGCCCTTCACGGATGGCTTCTGCCTTGCTCTCATTTTGAGCTGCAAAGGCGTTGTCGATATCTGCTCCTATGTCCTAGTCTATGATACAATGGCACAAAGTAAACGAGTAATAGATGTTATGATCATCTCAGTGTTGGTCCTAGGAACAGCTTCGAGGTTTGGCGTGAAGACATTGTACGACCCTGCAAGGAAATACGCAGGGTACCAGAAAAGGAACATCATGAACTTGAAACACAACTATGAGCTTAGGGTTGTTGCATGCATCCACAAGCCATGCCACACGGTTCACATCAAGAACGTGCTCCAGGTTTGTTCCCCTGCACCGGAGAACACACTAGTGGCAGATATTGTGCACCTCATGGAGCTAATTGGAAGGTCCACTCCCATTTTCATTGCACACAAGCTTCAGCAAAGTGTAGGGTCAGCATTCTACAATTACTCCGGGGAACTCATTTTGACCTTCGACCTTTTCGAACGCGACTATGCCGGTTCCGCCACTGCCAACACCTACACCGCCATATCCCCATTGACACTAATGCATGAAGATGTTTGTAACCTTGCTTTGGACAAAAATGCAGCCCTTATAATCCTTCCGTTTCACGTGAAATGGGGAGGGGATGGTTCAATTGAGTCTGAGGACATGAACATAAGGTCACTGAATTCCAAGGTTTTGGATAGGGCACCTTGCTCAATTGGGATTCTAGTGAACCGTGGCCTTTCTAACTTCAACTCAATGTGTTACAAAGTGGCCATGGTTTTCTTGGGTGGACCTGATGATAGAGAGGCCTTGTGCTTGGCTAAGAGGTTCGCGAAAAATCTCGATAATAGGTTGTTTGTGTATAGGTTGCTTGCGCATGACCACGATAACTCGAATTGGGATCACATGATTGATGATGAGGAGTTGAGGGAGGTGCGTGGAGCTTATGTGCAACTTGAAAATGTGACATATGAAGAGAGGACTATAGAAGATGCATCCCAGACAACGTTTTTCATCAAAGATATAGCCAACAGATTTGATTTTATTGTAGTTGGGAGACGCAATGGGGTCAAAACTTCTCAGACATCTGGGTTGGAAAATTGGACTGAATATTCGGAGTTGGGGGTCATTGGTGATTTGCTTGCTTCACCGGATACCGAGACCAAGGCTTCAATTTTGGTTGTGCAACAACAACAGTTATGA 2367 0.4487 MNLNQTIFSSVTFLYNVPEKRHEVYNVCMDQPMKIISNGIWTHHNGAIPSESAFTMLELQIVTIFAVTQSFHFILKRLGIPYFVSQVMAGFLLGPSIPTGPFEKYKKMLFPFGSPDMVSTLSSLGYSFYLFINSVQMDLSLITKTGRKAWVISLSSYFISVMVGFAIMIMFIPTWERLLNEDIVSILPVVIISQSGSSFAVVSALLNDLGILNSELGRLALSTSFVIDLTGGIMTGFGADFVRSIDLEFSVRVINMVAFFVYLILVPLIGRPAMRWIVKNTPEGKPVDKKYIYAIIVGFLGLGFFAGYFNQPFLVGAVILGLAVPEGPPLGSELVTQLELFSTWFLSSIFVTCCIMKVDLKQCNSLSFTVVVCFFIIMAHLVKSLMCMGICRYCKMPFTDGFCLALILSCKGVVDICSYVLVYDTMAQSKRVIDVMIISVLVLGTASRFGVKTLYDPARKYAGYQKRNIMNLKHNYELRVVACIHKPCHTVHIKNVLQVCSPAPENTLVADIVHLMELIGRSTPIFIAHKLQQSVGSAFYNYSGELILTFDLFERDYAGSATANTYTAISPLTLMHEDVCNLALDKNAALIILPFHVKWGGDGSIESEDMNIRSLNSKVLDRAPCSIGILVNRGLSNFNSMCYKVAMVFLGGPDDREALCLAKRFAKNLDNRLFVYRLLAHDHDNSNWDHMIDDEELREVRGAYVQLENVTYEERTIEDASQTTFFIKDIANRFDFIVVGRRNGVKTSQTSGLENWTEYSELGVIGDLLASPDTETKASILVVQQQQL 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01828 788 Pfam Sodium/hydrogen exchanger family 66 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo1g01828 788 Gene3D - 55 462 IPR038770 -
Pumo1g01828 788 PANTHER CATION/H + ANTIPORTER 28 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01828 Pumo-Chr1 33463452 33488803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01828 27 783 Antiporter Super Family AT3G44900 34.777 5.00e-147 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01828 K26731 - gmx:100797272 1314.67