Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01802 ATGACTTTTGATGTGTTCCTTCTTAGAGAACTTGGTGTTGCAGTTCTCATCCTCTTCATCTCTCATATTTCCATTAGATTAATCATCAGAAACAATTCTAAACATCTACCACCAGGCCCAAGAGGATGGCCAATTCTTGGTGTTCTACCACTTTTGGGCACCATGCCTCATGTCACACTCTCAAACATGGCCAAGAAATTTGGGCCAATCATGTTCCTCAAAATGGGCACTTGTGACACTGTGGTTGCCTCAAGCCCAGATGCAGCCCAAACATTCCTAAAGACATTGGACCATAATTTCCTAAACAGGCCCAAAATTGCTGGGGTAACCCACTTGGGCTACAATGCCCAAGACATAGTTTTTTCAAACTATGGGCCCAAATGGAAGCTCCTTAGGAAGCTAACCAGCCAACACATGCTTGGTGGGAAGGCCCTTCATGATTGGGCCCATATGAGAGCAAGTGAAGTGAAACACATGCTAAGAGCTATGCATGGGTGTGCCAAAAAAGGGGAACTAGTAGAGGTGGGTGATTTGTTGAGTTGTACAATTACTAATATGGTGAGCCAAGTGGTACTTTCTCACCGTATATTTTCAAATAAAGGGTTGGAATCTAAGGAGTTTAAGGACATGGTGGTGGAATTCATGACAATTTCTGGGGTCAACATTGGTGATTTTGTGCCTTGTATTGCTTGGATGGACTTGCAAGGTGTGGTGGGTAAGATGAAAAAATTGCACAAGAGGTTTGATGTGTTTTTAACCAAGATTATTGAGGAGCATGTGAAGTCTTCTCATGAGCGTAAGGGGAAACCAGATTTTCTTGATGTTGCGATGGCAAATAATGGAGAAGATCCTTCTGAAGAAAGATTGAATTTGTCAAGCATTAAGGCTCTATTATTGAATCTGTTCACTGCAGGGACAGACACATCATCTAGCATCATAGAATGGGCACTAGCTGAAATGTTGAAAAACCCCAATATCTTGATAAGGGCACAGAAAGAGATGGATCAAGTGATAGGAATCCAAAGACTACTTGTTGAATCTGACCTACCCAAATTACCATACCTTCAAGCAATCTGCAAGGAGACATATAGGATGCACCCATCTACACCCCTTGGTGTTCCAAGGGTGGCAGCTGAAGCATGCCAAGTTAATGGATACTACATCCCCAAGAACACAAGGTTAAGTGTGAACATTTGGGCCATAGGGAGAGACCCCAATGTGTGGTCCAACCCACTAGAGTTCAATCCAGAGAGGTTTCTTATTGGGAAGAGTGCAAAAATTGATCCCAGTGGAGTTGATTTTGAGTTGATTCCCTTTGGTGCTGGAAGGAGGATTTGTGCAGGTTATAGAATGGCCATTGGGGTCATTGAGTTCATTTTGGGCACTTTGGTGCATTCTTTTGACTGGAAGTTACCAAATGGAGTTGAGCTAAACATGGATGAGGCCTTTGGACTCACTTTGCAAAAGGCTGTGCCTCTGTCAGCTATGGTTAGCCCTAGGTTGGTCCCAGATGCTTATGTTTGA 1524 0.4331 MTFDVFLLRELGVAVLILFISHISIRLIIRNNSKHLPPGPRGWPILGVLPLLGTMPHVTLSNMAKKFGPIMFLKMGTCDTVVASSPDAAQTFLKTLDHNFLNRPKIAGVTHLGYNAQDIVFSNYGPKWKLLRKLTSQHMLGGKALHDWAHMRASEVKHMLRAMHGCAKKGELVEVGDLLSCTITNMVSQVVLSHRIFSNKGLESKEFKDMVVEFMTISGVNIGDFVPCIAWMDLQGVVGKMKKLHKRFDVFLTKIIEEHVKSSHERKGKPDFLDVAMANNGEDPSEERLNLSSIKALLLNLFTAGTDTSSSIIEWALAEMLKNPNILIRAQKEMDQVIGIQRLLVESDLPKLPYLQAICKETYRMHPSTPLGVPRVAAEACQVNGYYIPKNTRLSVNIWAIGRDPNVWSNPLEFNPERFLIGKSAKIDPSGVDFELIPFGAGRRICAGYRMAIGVIEFILGTLVHSFDWKLPNGVELNMDEAFGLTLQKAVPLSAMVSPRLVPDAYV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01802 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Pumo1g01802 507 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PANTHER CYTOCHROME P450 98A9 13 504 - -
Pumo1g01802 507 Pfam Cytochrome P450 37 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 Gene3D Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 FunFam Flavonoid 3',5'-hydroxylase 2 28 497 - -
Pumo1g01802 507 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01802 507 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01802 Pumo-Chr1 31829184 31832433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01802 13 506 Cytochrome P450 AT5G07990 47.809 2.41e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01802 K13083 - qsu:112039568 733.406