LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo1g01762	ATGGAAAGCCAAAGCCAACTTGAAGTTTCAAATTCCGAGCAACAGAAAAAGGGAACCACCTTCATCAAAACTTGTTTCAATGGAATCAACTCTTTGACAGGTCTTTCATTCTATCTCTCAAACTTCTGTGCAGTAACTTATGCATACAAAGAAGAATTGCTATTGAATTTACTTTTCACGTATTGGGATACTCTCAATGCCGTATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATTCTGCTACTCATTTTTGCAATGATATTTTGGTACACGGGGTTACTTCTACAAAGGTGAGGTTGTTTTGGGCAAAGAGGAAGAGCTGTGATTGCCACATTCATATACATAGAGCTGTTTTTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGGTTTCATGAAAGAGGCCAGTTGGTAAACTGGGAGGGATTGACTACTGCTATGAGCCTTTTTGCATTTTGTTATTGTGCACATGCAGTGATGCCCACACTTGTCAATTCTATGAATGATAGAAGCCAGTTTAGCAAGGTTTTGATTGTTTGCTTTGTGGCAAGCACTATTATCTATGGAACCATAGCTGTTTTAGGCTACACAATGTTTAGAGACTATTTGATGTCTCAAATTACCTTAAATCTACCATCAAAGAAAATAAGTACTAAATTAGCTATTTATTCCACAATAATCAATCCTTTCACCAAGTATGCTGTTCTAATCACCCCAATAGCAAATGCTATTGAAGACAAATGGCTTCTCTGCAAGAGAATGCCTGTTGCCATTTTGATTAGAACAACCATTGTGGTCAGCACTGTGCTTATGGCACTATTCATGCCATTTTTTGGTTACATCATGGCGTTTATTGGTGCATTTTTTAGTGTGACAATCTCAATGCTGTTCCCTTGCATCTCTCACCTAAAGATGAACAAAGCTGCTAGGCAATTTGGGTTGGAGTTGATCATCATTATTGGAATTGTCTTCATAGGTACATTCATTGGAATATTGGGTACCTACCTTTCTGTGAGGCACATAGTGAATCATCTGTAG	1044	0.386	MESQSQLEVSNSEQQKKGTTFIKTCFNGINSLTGLSFYLSNFCAVTYAYKEELLLNLLFTYWDTLNAVCSFSRRVVEFYSATHFCNDILVHGVTSTKVRLFWAKRKSCDCHIHIHRAVFGCVVWVGEVDGVGFHERGQLVNWEGLTTAMSLFAFCYCAHAVMPTLVNSMNDRSQFSKVLIVCFVASTIIYGTIAVLGYTMFRDYLMSQITLNLPSKKISTKLAIYSTIINPFTKYAVLITPIANAIEDKWLLCKRMPVAILIRTTIVVSTVLMALFMPFFGYIMAFIGAFFSVTISMLFPCISHLKMNKAARQFGLELIIIIGIVFIGTFIGILGTYLSVRHIVNHL	347

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo1g01762	347	Pfam	Transmembrane amino acid transporter protein	140	337	IPR013057	-
	Pumo1g01762	347	PANTHER	OS05G0424000 PROTEIN-RELATED	123	325	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo1g01762	Pumo-Chr1	29817517	29820158	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo1g01762	119	345	Amino Acid or Auxin Permease AAAP Family	AT3G28960	46.522	9.62e-75	234

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo1g01762	K15015		-	gmx:100812006	409.453