Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01760 ATGCCGTATGCAGTTTCTCAAGGAGGGTGGCTGAGTTTTATTCTACTAATCATTTTTGCAATGATATGCTGGTACACAGCGTTGCTTCTACAAAGGTGTATGATTAAGCATCCGTTAATCAAATCGTATCCTGACATAGGTGATGTTGCTTTTGGGTACAGAGGAAGAGCTATGATAACTGCATTCATATACGTAGGACTGTTTTTAATTGCTGTTGAGCTTCTGATATTGGAAGGTGACAACATGGAGAAGTTGTTTCCACACATGAAGTTCAAGATTGGTGGCCTTAGAATTGAAGGTAAAAAGGGTTTTGTCCTGCTAGCTGCTTTGGTGATACTACCAACAACGTGGTTGAGAAGATTGGGAGCTCTGGCTTATGTTTCTCTTGGTGGGGTAATGGTTTCTATTGTTTTAATTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTAGGGTTTCATGAAAGAGGAAAGATAGTAAATTGGGAGGGATTGCCTACTTCTGTGAGCCTTTTTGCATTCTGTTACTGTGCTCATTCAGTGATGCCAACACTCTGCAATTCTATGAATGATAGAAGTCAGTTTAGCAAGGTTTTGGTGGTTTGCTTTGTGGCAAGCACTGTTACCTATGGATCCATAGCTATTTTAGGCTACAAAATGTTTGGAGATCATTTGATGTCTCAAATAACCTTAAATCTACCTTCTAAGAAAATAAGTACCAAAATAGCAATTTTTACCACAGTAATCAACCCTTTCACTAAGTATGCTGTTCTAATCACCCCAATAGCAAATGCTATCGAGGACAAATGGCTTATTTGCAAGAGAAAGCCTATTGCCATTCTCATTAGAACAACCATTGTAGTCACCTCTGTGCTTATGGCACTATTCATGCCATTTTTCGGTTACATTATGGCATTTATTGGTTCATCCTTTAGTGTGGCAATGTCATTGTTGTTCCCTTGCATGTGTTACGTAAAAATAAACAAAGCTGCTCGACAATTTGGGTTGGAGTTGATCAGCATCACTACAATTCTTCTCATAGGTACATTCATTGGAATACTGGGTACCTACCTCTCTGTGAGGCACATAGTGAATCATCTATAG 1104 0.394 MPYAVSQGGWLSFILLIIFAMICWYTALLLQRCMIKHPLIKSYPDIGDVAFGYRGRAMITAFIYVGLFLIAVELLILEGDNMEKLFPHMKFKIGGLRIEGKKGFVLLAALVILPTTWLRRLGALAYVSLGGVMVSIVLIGCVVWVGEVDGVGFHERGKIVNWEGLPTSVSLFAFCYCAHSVMPTLCNSMNDRSQFSKVLVVCFVASTVTYGSIAILGYKMFGDHLMSQITLNLPSKKISTKIAIFTTVINPFTKYAVLITPIANAIEDKWLICKRKPIAILIRTTIVVTSVLMALFMPFFGYIMAFIGSSFSVAMSLLFPCMCYVKINKAARQFGLELISITTILLIGTFIGILGTYLSVRHIVNHL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01760 367 PANTHER OS05G0424000 PROTEIN-RELATED 1 337 - -
Pumo1g01760 367 Pfam Transmembrane amino acid transporter protein 1 356 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01760 Pumo-Chr1 29754209 29757503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01760 1 364 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.232 5.10e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01760 K15015 - gmx:100812006 623.239