Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01709 ATGGATCTAGAATCTAGTCAGGCAACAGGTGAACACGGGTCAGGAACAAGTGATAGTGAGGAAGTTGGTGATCATGAAATTGGAGTAGATGAGAAAAACGATGAACCTGATCCCAAGAGAAGAAACACAGAAACCAGGCTCCAGGATCCAGCCTCTTTGCATAGAACTGTAGCAGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTGGATCTCTTAGATGATGGATATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAATGCACAACTGCGGGTTGCAACGTTCGGAAGCATGTTGAGAGGGCCTCAACGGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAAGACTAATAGCCACACACTTGCCAACAATAGTGCATCACAGCTAAAAGCACAAAATATCGCCATGCCTGACGAGAAGCATAGCTTCAGCAACAGGGGTGTTGGGGGCAATGAGCAGCGACCTGTGGCAAGTCTAAGATTGAAGGAAGAGCAGATAACATAG 567 0.4497 MDLESSQATGEHGSGTSDSEEVGDHEIGVDEKNDEPDPKRRNTETRLQDPASLHRTVAEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTLANNSASQLKAQNIAMPDEKHSFSNRGVGGNEQRPVASLRLKEEQIT 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01709 188 ProSiteProfiles WRKY domain profile. 68 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo1g01709 188 FunFam WRKY transcription factor 33 60 126 - -
Pumo1g01709 188 Gene3D WRKY domain 58 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo1g01709 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 153 IPR044810 GO:0003700
Pumo1g01709 188 MobiDBLite consensus disorder prediction 1 59 - -
Pumo1g01709 188 SUPERFAMILY WRKY DNA-binding domain 65 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo1g01709 188 MobiDBLite consensus disorder prediction 1 16 - -
Pumo1g01709 188 MobiDBLite consensus disorder prediction 17 48 - -
Pumo1g01709 188 MobiDBLite consensus disorder prediction 153 188 - -
Pumo1g01709 188 SMART WRKY_cls 73 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo1g01709 188 Pfam WRKY DNA -binding domain 74 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01709 Pumo-Chr1 28707887 28709073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01709 2 188 WRKY Transcription Factor Family AT2G03340 68.421 1.73e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo1g01709 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01709 - - gmx:100802109 352.058