Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01702 ATGCTATCATCAGAGAAGAAGAGACAGTCATTCACTCCTTCTCATGGACATGAAAGAGATGTAGTTCTTCTGAGAAGTCAGGAAAAGCTCATATCTCTTGTTACTGAAGAAAAGGGGAAAAAAAAAGCACATCAGTCATGGACTGAACCCACTGCCAGAAGAATGCCAATGCCCCATGACGGGCATGGATTTCACCCTGACTCCATGAATTACTCTTGTTATGGTCAACCGGAACATGATACTGAACTTTCAAATTCTGCAACATCCTTCAACAAACGAAGGATAGGTGAGATATCGAGTGACCTTGTCAACCAAATGGTAGAATGCGAAATGAGCCACTCCTTGGGAAAATTGACTGACTTTGATATTGAAGCATTTGAGGTTGGTGTTGACATAGCTGAGGATATACTTCAAACTTTGGTTGATGAAGTTGTTGAAGACCTTGCAGGTTGCAAGCAGGGCACAATTTCCTTCTAA 477 0.4172 MLSSEKKRQSFTPSHGHERDVVLLRSQEKLISLVTEEKGKKKAHQSWTEPTARRMPMPHDGHGFHPDSMNYSCYGQPEHDTELSNSATSFNKRRIGEISSDLVNQMVECEMSHSLGKLTDFDIEAFEVGVDIAEDILQTLVDEVVEDLAGCKQGTISF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01702 158 Pfam Domain of unknown function (DUF4378) 100 143 IPR025486 -
Pumo1g01702 158 MobiDBLite consensus disorder prediction 1 20 - -
Pumo1g01702 158 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 99 147 - -
Pumo1g01702 158 MobiDBLite consensus disorder prediction 36 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01702 Pumo-Chr1 28572317 28575336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01702 102 153 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 40.385 7.99e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01702 - - gmx:100813026 103.99