Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01699 ATGGGGCATGGATTTCACCCTGACTCCATGAATTACTCTTGTTATGGTCAACCGGAACATGATACTGAACTTTCAAATTCTGCAACATCCTTCAACAAACGAAGGATAGGTGAGATATCGAGTGACCTTGTCAACCAAATTCCCAGGGCATTAGAAAGTTTGCACACATTTGGGATAGAATTGACAAGAAGCAAGCTCAACCAAATGGATGATGTTCTCTTGCATGCTGAGTTGGTGCTTGGAATTACAACTGCCCTCAGAGAGGATGAAGGGCCACAACTTCGGATATATCAGTTCCTCCGTGATGATCTTGTCGGTAAGGCAAGTGATGCTATGTGGGCAGATGCTAATGGCGTTTGTGAGGATTCTAAACAGATAAAGGAGCTAAAGGGCTTTCTCCTTGATTGTGTTATAGAATATCTAGAATCAAATTGCTGCCAATATTTTAACTCTGGATTCAAGACATGGATAAAGCTGCCCTTATGCATGAAACCTGAGATGTTGGCTCAAGAGGTGAAGAGGGAGATCAACAAGTGTTTATCTGTGGTTGGGATGGAGCCTGTTAAAATGGTAGAATGGGAAATGAGCCACTCCTTGGGAAAATTGACTGACTTTGATATTGAAGCATTTGAGGTTGGTGTTGACATAGCTGAGGATATACTTCAAACTTTGGTTGATGAAGTTGTTGAAGACCTTGCAGGTTGCAAGCAGGGCACAATTTCCTTCTAA 729 0.4211 MGHGFHPDSMNYSCYGQPEHDTELSNSATSFNKRRIGEISSDLVNQIPRALESLHTFGIELTRSKLNQMDDVLLHAELVLGITTALREDEGPQLRIYQFLRDDLVGKASDAMWADANGVCEDSKQIKELKGFLLDCVIEYLESNCCQYFNSGFKTWIKLPLCMKPEMLAQEVKREINKCLSVVGMEPVKMVEWEMSHSLGKLTDFDIEAFEVGVDIAEDILQTLVDEVVEDLAGCKQGTISF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01699 242 Pfam Domain of unknown function (DUF4378) 124 227 IPR025486 -
Pumo1g01699 242 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 10 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01699 Pumo-Chr1 28540590 28543964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01699 19 232 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 26.364 4.04e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01699 - - gmx:100809045 384.03