Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01697 ATGGAGAGACTGCTGGTACCTACGATGAACTTCTTATGCAAATTAAGGAAAAGGGGCACTCCAAAGAACCAAATCGGCATGGCTCTCTGGTTTTCCTTCTCAACACTCGTCTTTGCTCACAGGGAGGAGGTAGTGAACAATTGGTCACGATTTGTGCTGATTATATGGTTCTTTGTGGTACTCATCATAACGCAAAGTTACACTGCAAGTTTAGCTTCAATTCTGACGGTACAAAAACTGCAGCCTGTGTTTATGAACGTAGAAGAGGTAAAAATAAACAATTACTCTGTGGGATATCCTCAGGGTTCCTTTGTGAAAGGGCTACTAATAGAAAAGTTAGGATTCAATGAATCTAAGTTGAAGGGTTACCACGGCCCTGAGGCCTATCAACAAGCTCTGTCTCTTGGTAGCAACAACGGAGGAGTCGCTGCTGTTTTTGATGAAATTGTGTTTATTAACCTCTTCCTCATGAAATATGGCTGCAAAAAGTATTAG 495 0.4162 MERLLVPTMNFLCKLRKRGTPKNQIGMALWFSFSTLVFAHREEVVNNWSRFVLIIWFFVVLIITQSYTASLASILTVQKLQPVFMNVEEVKINNYSVGYPQGSFVKGLLIEKLGFNESKLKGYHGPEAYQQALSLGSNNGGVAAVFDEIVFINLFLMKYGCKKY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01697 164 Gene3D - 9 105 - -
Pumo1g01697 164 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 18 164 IPR015683 -
Pumo1g01697 164 Pfam Ligand-gated ion channel 20 91 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01697 Pumo-Chr1 28512527 28513766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01697 18 156 Ion Channels AT3G51480 52.518 5.82e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01697 K05387 - gmx:100800495 263.077