Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01696 ATGGTTGGACCAACATACAAAACCGATGGCTTTGCCTTTGCATTCCCACGAAACTCTCCGTTGGTTCCTTATTTTTCGAGGGCGATCATAAACGTCACTGAAAACAAAACAACTTTTGATGAGATTAAGAAGAAGTACTTCTCAAGCGACGTCATAGGTGAAGATCCAACAAGTACCACAGTGGCATTTGGAAGCCCGAACTTAACATTAAAGAGCTTTGGGGGGCTTTTCATCATCACATTGTTCACTTCATTGCTCCCACTCATGGTCCATTTGTTTAAGTTCATACATTCAAAATGGACTACTCGAGACTTTCAGCGATCCCTTTTGGAGATGATGACTGAATTGGCAAAGCATCTCAGCAAAGAAGAGTGCTCTTTGCACCCTCCTCCAAATAGTTTGGGAACAGAGGAAGGTTCACTTGACCCTGATGGCACCCATGGTCAATCAATAATTCACAACGAGGAAGATCTAAGTTGTTACCTTAACCGCAAGGAGGGGGATGTTGAAGGCAGGGCTATTGACTGGAGTGAAGTCATAACAAGGTAG 549 0.4353 MVGPTYKTDGFAFAFPRNSPLVPYFSRAIINVTENKTTFDEIKKKYFSSDVIGEDPTSTTVAFGSPNLTLKSFGGLFIITLFTSLLPLMVHLFKFIHSKWTTRDFQRSLLEMMTELAKHLSKEECSLHPPPNSLGTEEGSLDPDGTHGQSIIHNEEDLSCYLNRKEGDVEGRAIDWSEVITR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01696 182 Gene3D - 1 52 - -
Pumo1g01696 182 SUPERFAMILY Periplasmic binding protein-like II 1 51 - -
Pumo1g01696 182 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 110 IPR015683 -
Pumo1g01696 182 MobiDBLite consensus disorder prediction 124 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01696 Pumo-Chr1 28511350 28512526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01696 1 128 Ion Channels AT2G29110 36.923 1.37e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01696 K05387 - gmx:100800495 259.225