Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01680 ATGGAGAAGGAGAGAGAGACCCAAGTTTACTTGGCCAAGCTCTCTGAACAAGCCGAGAGATATGAAGAGATGGTTGAATGCATGAAGAAAATTGCAAAACTTGATCTAGAACTGACTGTTGAAGAGAGGAACCTGCTCTCAGTGGGATATAAAAATGTGATTGGTGCAAGAAGAGCCTCGTGGCGCATTATGTCATCAATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAGCAATGCAAAACTGATCAAGAATTATCGCCAAAAGGTCGAAGAGGAACTATCCAAGATTTGCAGTGACATTCTCAGCATTATTGACCAGCATCTCGTTCCTTCTTCCACCTCAGGAGAAGCCACCGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATCTAGCAGAGTTCAAGACCGACCAAGATAGAAAGGAGGCAGCTGAGCAATCACTAAAGGGATATGAGGCTGCTTTAGCTACTGCAAACACAGATCTTCCATCCACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTATGAGATACTGAACTCTCCTGAAAGGGCATGTCATTTGGCTAAGCAAGCTTTCGATGAGGCAATTGCAGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAATCTGACTCTCTGGACCTCAGATTTACCTGAGGATGGAGGTGACGAAATCAAAACAGAAGAAGTCAAACCTGCTGAAGAGGTTTGTGTGTGA 774 0.4328 MEKERETQVYLAKLSEQAERYEEMVECMKKIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNAKLIKNYRQKVEEELSKICSDILSIIDQHLVPSSTSGEATVFYYKMKGDYYRYLAEFKTDQDRKEAAEQSLKGYEAALATANTDLPSTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKTEEVKPAEEVCV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01680 257 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Pumo1g01680 257 Gene3D - 1 245 IPR036815 -
Pumo1g01680 257 PANTHER 14-3-3 PROTEIN 5 235 IPR000308 -
Pumo1g01680 257 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Pumo1g01680 257 SMART 1433_4 5 246 IPR023410 -
Pumo1g01680 257 Pfam 14-3-3 protein 11 233 IPR023410 -
Pumo1g01680 257 Coils Coil 143 163 - -
Pumo1g01680 257 Coils Coil 11 31 - -
Pumo1g01680 257 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Pumo1g01680 257 PIRSF 14-3-3 1 245 IPR000308 -
Pumo1g01680 257 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Pumo1g01680 257 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Pumo1g01680 257 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Pumo1g01680 257 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Pumo1g01680 257 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Pumo1g01680 257 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Pumo1g01680 257 FunFam 14-3-3 protein epsilon 1 246 - -
Pumo1g01680 257 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01680 Pumo-Chr1 28369407 28374627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01680 2 250 14-3-3 family AT1G26480 87.200 1.36e-163 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01680 K06630 - gmx:100798385 492.271