Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01666 ATGAAGCTGGGGCTGCGAATCCTCCTCATTGCTCTGGTGCTGGTGTTGTGCGCTCCATTTTCATCTTCTTCGAAACCCAAAGACCCGTTCCTCGGAATCGCGCCCGAAGATGACAAGTATTACAAGGCTTCCGATGTAATAAGGTGTAAAGATGGATCCGCAAAATTCAGCAAGGCGCAGCTCAATGACGATTTTTGCGATTGCGCTGATGGCACCGATGAACCTGGTACATCGGCATGTCCCGGTGGAAAATTTTATTGTCGGAATGTAGGACATTCCCCTGTTTACTTGTTTTCATCTAGAGTGAACGATGGAATTTGCGATTGCTGTGATGGAACTGATGAATACGATGGTCAAGTAAAGTGTCCAAATACCTGCTGGGAGGCTGGTAAAGTTGCTCGAGATAGACTGAAAAAAAAGATTGACACTTATCAAGAGGGAGTCAAATTGCGAAATCAAGAAATTGAACAAGCTAAAGTAGCTATGGAGAAGGATGAGGCAGAACTTTCAAAATTAAAAAAGGAAGAAAGTATACTTAAAGGGATCGTGAAACAGCTAAAGGATCATAAAGAACAAATAGAGAAGGCAGAGGAGAATGAACGTTTACAGAAAGAAAAAGAAGAGAAGCAGAAAAAGGAGTCTGAGGAGAAGGCTAATGAAGCAAAAGATAAAGATGAAGATACGGGGCATAGAAATGAAGCTGGAAAGCATTCAGATGTTGAAGACAATTCTGTAGAAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCAGATCAGGATGAAGCAGGGGACAAATTAGCAGATGTACTTGATAATGATGATGGAGCCAGTGATAGTCCTGGGAGTGAAGGATCTTTGGATAATAAAGTGGAAGAGAATGCAAAAGAAGCTGAGGAAGAACCTATTGTTAAATCTGATGAAGATTTTAAGGTCGGAAACAAAGAGTCTTCACATGAAATCATCAATAAGGGGAATGACGTATCTGAAAATACCGAGGGATTATCAAGGGAAGAGTTGGGCCGGCTTGTTGCTTCACGTTGGACAGGAGAAAATACTGATAAGCAAAGTGCTGAACCTGATACTACATTAGACAATGAAGATCATGAAGATCTTCCAAAGGGGACAAATAATGAGGAACATGAAGGCTATGCTTCTGAAACTGATGATGACATTGACAGCAACAAATATGATGATGACAGCCACAAATATGACGATGAAGATGAAATTGATGAAGAATATCGAGAGGATGAGCATGATGACCTTACTTCCTCCTACAAATCTGATTCTGATAATGAACCAGACTTGTCAGATAATCCTTCTTGGTTAGAGAAAATACAGAGAACTGTACGGAATATTTTTCAGGCTGTTAATTTATTCCAGGCTCCAGTGAACCAGTCAGATGCTGCTCGTGTACGCAAGGAATATGATGAATCAAGTGCCAAGTTGTCTAAAATACAGTCTAGAATATCAAGTCTGACGCAAAAGCTAAAACATGATTTTGGTCCAGCAAAGGAGTTTTATTCATTCTATGATCATTGCTTTGAGGGCAAGGAGAACAAGTACACTTACAAAGTCTGCCCCTATAAACAGGCTTCTCAGGAGGAGGGCTATTCCACCACCCGTTTGGGGAGCTGGGACAAATTTGAGGATTCATACAAAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTCTGAAGGTCAAGCTAAGATGTGGGTTGAAAAACGAGATTACTGATGTGGATGAACCAAGCCGTTGCGAATATGTAGCTATATTATCTACCCCAGCCCTTTGTCAAGAGGAAAGGCTGAAGGAGTTACAACACAAACTAGACTTGTTGAATTCAGAACAGCCAGCAAGCCATGATGAGTTATGA 1902 0.409 MKLGLRILLIALVLVLCAPFSSSSKPKDPFLGIAPEDDKYYKASDVIRCKDGSAKFSKAQLNDDFCDCADGTDEPGTSACPGGKFYCRNVGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAGKVARDRLKKKIDTYQEGVKLRNQEIEQAKVAMEKDEAELSKLKKEESILKGIVKQLKDHKEQIEKAEENERLQKEKEEKQKKESEEKANEAKDKDEDTGHRNEAGKHSDVEDNSVENNHDKIENLEGSPADQDEAGDKLADVLDNDDGASDSPGSEGSLDNKVEENAKEAEEEPIVKSDEDFKVGNKESSHEIINKGNDVSENTEGLSREELGRLVASRWTGENTDKQSAEPDTTLDNEDHEDLPKGTNNEEHEGYASETDDDIDSNKYDDDSHKYDDEDEIDEEYREDEHDDLTSSYKSDSDNEPDLSDNPSWLEKIQRTVRNIFQAVNLFQAPVNQSDAARVRKEYDESSAKLSKIQSRISSLTQKLKHDFGPAKEFYSFYDHCFEGKENKYTYKVCPYKQASQEEGYSTTRLGSWDKFEDSYKVMVFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVAILSTPALCQEERLKELQHKLDLLNSEQPASHDEL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01666 633 Coils Coil 471 491 - -
Pumo1g01666 633 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 11 633 IPR039794 -
Pumo1g01666 633 MobiDBLite consensus disorder prediction 421 436 - -
Pumo1g01666 633 MobiDBLite consensus disorder prediction 291 325 - -
Pumo1g01666 633 Coils Coil 148 224 - -
Pumo1g01666 633 Gene3D - 509 607 IPR009011 -
Pumo1g01666 633 ProSiteProfiles MRH domain profile. 514 609 IPR044865 -
Pumo1g01666 633 Pfam Glucosidase II beta subunit-like protein 475 633 IPR036607 -
Pumo1g01666 633 Coils Coil 605 625 - -
Pumo1g01666 633 MobiDBLite consensus disorder prediction 360 405 - -
Pumo1g01666 633 MobiDBLite consensus disorder prediction 195 442 - -
Pumo1g01666 633 Pfam Glucosidase II beta subunit-like 25 174 IPR028146 -
Pumo1g01666 633 SUPERFAMILY Mannose 6-phosphate receptor domain 514 607 IPR009011 -
Pumo1g01666 633 MobiDBLite consensus disorder prediction 195 275 - -
Pumo1g01666 633 MobiDBLite consensus disorder prediction 406 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01666 Pumo-Chr1 28199629 28207675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01666 21 633 Calmodulin-binding Proteins AT5G56360 59.300 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01666 K08288 - gmx:100807083 1111.29