Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01664 ATGGAGAACCAAAGCCAACTCCAAGTTTTAAATTCGGGGCAACACAAAAAAGGAACCACCTTCTTCAAAACTTGTTTAAATGGAATCAATTCCCTAGCAGGTATTGGGGTACTCTCAATGCATTATGCAGTTTCTCAAGGAGGGTGGCTAAGTTTTGTTGTGCTAATCATATTTGCAATCACATGTTGGTACACAGCATTGCTTATACAAAGGTGTATGATTATGCATCCATTAGTCAAATCCTACCCTGACATTGGTGCGGTTGCTTTCGGGTACAAAGGAAGAATAGTGATAGCAATATTCACCTATGTAGAATTGTTTTTAGTTGCTGTGGAGCTTCTGATATTGGAAGGTGACAACTTGGATAAGTTGTTTCCAAATGTGAACTTCAAAATTGGTCACCTTATGATTAAGGGTAAAAAGGCTTTTGTCATGCTAGCTGCTTTGGTCATATTACCAACAACGTGGTTGAGAAGCCTGGGAGTTGTGGCCTATGTTTCACTTGGTGGTGTACTGGTTTCTATTGTTTTAATTGTTTGTGTTGTGTGGGTGGGTGTTGATGGTGTGGGGTTTCATGAAAGAGGCAAGTTAGTAAATTGGGAAGGACTGCTTACTACTGTGAGCCTTTTTGCGTTCAATTATGGTGCACATGGAGTAATGCCAACTCTCTGCAATTCTATGAATGATAGAAGTCAGTTTTTCAAGCATGTTATGTAA 717 0.3961 MENQSQLQVLNSGQHKKGTTFFKTCLNGINSLAGIGVLSMHYAVSQGGWLSFVVLIIFAITCWYTALLIQRCMIMHPLVKSYPDIGAVAFGYKGRIVIAIFTYVELFLVAVELLILEGDNLDKLFPNVNFKIGHLMIKGKKAFVMLAALVILPTTWLRSLGVVAYVSLGGVLVSIVLIVCVVWVGVDGVGFHERGKLVNWEGLLTTVSLFAFNYGAHGVMPTLCNSMNDRSQFFKHVM 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01664 238 PANTHER AMINO ACID TRANSPORTER 12 233 - -
Pumo1g01664 238 Pfam Transmembrane amino acid transporter protein 18 234 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01664 Pumo-Chr1 28181678 28183817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01664 2 233 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.639 3.77e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01664 K15015 - gmx:100812006 333.569