Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01639 ATGGCGAGGTTGAAGGTTTTGTCAGCCCTAGACACAGCAAGGACACAATACTACCACTTCAAGGCCATCATCATTGCAGGGATGGGGCTCTTCACCGATGCCTACGACCTCTTCTCAATCACTCTCATCATCAAGATGATCGGGAGGATTTACTACGACCACCGCGAAGGAGAAAACAAGTACGAGACCCCGCCGGCGGTCGTGTCCGCCTTGGTCGCCGTCGCCCTGCTGGGCACCGCCGTCGGCCAGCTTGTATTCGGCCGGCTCGGTGACCTCAAGGGGCGGCGGCACGTCTACGGGCTCGCCCTCTTGTTGATGGTCTTCAGCTCCTTGGCTTCTGGCTTCTCCATTTGCACAAGAAAAACATGCGTTCTCCTCAGTCTTGGCTTCTTCAGGTTTTTCTTGGGGCTGGGGATTGGTGGGGACTACCCTCTGTCTTCTACCATAATGTCGGAGTTTGCGAACAAGAGGACACGAGGGTCGTTCATAGCGGCGGTGTTTTCGATGCAAGGGTTCGGCATATTGGCGAGCTCCATCGTGACGATGGTGGTGTGCTCCATATTCCGTGCAGCGTCGAAGAAATCGGAGGCTGACGTGGCATGGAGGCTGATACTGATGCTGGGTTCAGTTCCGGCAGCCATGACTTACTATTGGCGCATGATGATGCCCGAAACCGCCAGGTATACAGCATTAGTGGAGCAAAATGTGATGCAAGCAGCAAAGGACATGGAGAAAGTCCTTGATGTAACACTGAGCCAGATTGCTGAAGAATATCCATTGTCACCAACCCCACATCCATACCCTCTCTTTTCAAGGGAATTCTTTCGTAGGCACGGTCGTGACCTTTTTGCATGTTCTTCTACATGGTTTCTAGTGGACATTGTGTTCTACAGCCAAGTTTTGTTCCAAAGTGAAATATACAAACGTTACCTCAAGAAAAAGGAAGACGTGGATGTGTATCAAGAGGCTTTCCATGTTGCATGGATCCAAGCCGTTATTGCTGTGTGTTCCACTATCCCTGGCTACTTCTTCTCTGTGTACTTCATTGACAAATGGGGCAGGGTCAAAATCCAAATGATGGGTTTTTTCTTCATGGCAATGGCCTTTTTCGCCATTGGGATTCCCTATTACTCTTATTGGACCAAAGAGGAGCATGATGAGAATAAAGGGTTCATGGTGTTGTATGGGCTTGCTTTTTTCTTTGCCAATTTTGGGCCCAACACTACTACTTTCATAGTCCCGGCTGAGCTTTTCCCAGCCAGGTTTAGGTCAACGTGTCATGGCATTGCTGGGGCAGTTGGCAAGGTTGGGGCAATTATTGGCTCTGTTGGGTTTCTTTGGGCTTCACATAATAAGAAGGAGTTTGGGTACCCTAAGGGAATTGGGATGCAAGTGTCCCTTATCATACTTGGAGGGGTGTGCTTATTGGGAATGTTGATCACCTACTTTTTCACCAAGGAAACCATGGGAAGGTCTTTGGAAGATAATGAGGTTGAGAGTGTGACTTATGAAGTTGAAGAGCATGACAATCTTTGA 1536 0.4915 MARLKVLSALDTARTQYYHFKAIIIAGMGLFTDAYDLFSITLIIKMIGRIYYDHREGENKYETPPAVVSALVAVALLGTAVGQLVFGRLGDLKGRRHVYGLALLLMVFSSLASGFSICTRKTCVLLSLGFFRFFLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASSIVTMVVCSIFRAASKKSEADVAWRLILMLGSVPAAMTYYWRMMMPETARYTALVEQNVMQAAKDMEKVLDVTLSQIAEEYPLSPTPHPYPLFSREFFRRHGRDLFACSSTWFLVDIVFYSQVLFQSEIYKRYLKKKEDVDVYQEAFHVAWIQAVIAVCSTIPGYFFSVYFIDKWGRVKIQMMGFFFMAMAFFAIGIPYYSYWTKEEHDENKGFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGIAGAVGKVGAIIGSVGFLWASHNKKEFGYPKGIGMQVSLIILGGVCLLGMLITYFFTKETMGRSLEDNEVESVTYEVEEHDNL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01639 511 CDD MFS_PhT 23 488 - -
Pumo1g01639 511 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 489 IPR020846 GO:0022857
Pumo1g01639 511 FunFam Inorganic phosphate transporter 1-6 18 510 - -
Pumo1g01639 511 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo1g01639 511 Pfam Sugar (and other) transporter 24 496 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pumo1g01639 511 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 494 - -
Pumo1g01639 511 Gene3D MFS general substrate transporter like domains 18 511 IPR036259 -
Pumo1g01639 511 SUPERFAMILY MFS general substrate transporter 10 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01639 Pumo-Chr1 27855757 27859970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01639 1 502 Inorganic Solute Cotransporters AT1G76430 62.906 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01639 K08176 - gmx:100797683 908.672