Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01635 ATGGATGATGAAGTTGTTCAGCGAGTGTTCCATGAAGGAGGACGCGATTACTTCCAGCAACAGCCTTCAACTTCTTCGTCTTCCTCTTCCATCCTCCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATCCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTACAGTTGGCATTGGTGGACCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATCGTGATGGAGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATACCCTGATCAAGAATCTTGAGGATTTGACTAGAGGCAATGATACATCAATCCCAGAGTTTGACTATCAGCAAAAGAGGCGTGTTGGCTATAAAGCAATAAAGAGTGCTTCATCTGGGGTGGTAATAGTTGATGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGAGTTGCTGTGGTTGGTGGTGTCCATTTTAGCTTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTGTTTAGGAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTTCAGATGGAGCTTTTCAAGGAAATGAGGCCCAAACAGATAATTTTATCGAAATGTACCTTAGACCACCTTCAGCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATTTATCACTTGGTGACCAGAGGATTGTTGACAAGAATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGCGGATTGTTGGCTCTTGGGTACACTGTTGTGGTTAGTTATAAGCGTGCATCCACAACTGTCAATAATGGCAAGGTTTCAATGTCTTTTGAAACCATTGATGTTCTTGGTGAGACATTCATGGTGATGAGAGGAACTAATAGAAAGACTGTTGGAACAGAAGCATTAAGGATGGGTATTAATGGACCTTGGATTACTAAATCTTATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTTAGTACACCACCACTTGTGTCTAATACAACTGTGGCTGGTAGTCAAGAAACAGTGATTGTTGCACCAAAGCCAATTCGTGTTACCCCTAACCTTGTTACTGGGCTTGAGGATTTACCTCAGCCGTGGACTCGATCCCCAACAAAATCTAAAATGGAACCTGTTGTGGCTGAATGGCATTTCATATCTTCAGATTCCTCCCAGCCTGACAACTCAGTCCTAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTGGATAGGGGATTGCTTTTGGCAGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTGTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGCTCTGGGAAGACTAGTTTAGCTCATAAAATGGCAAACATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGACTTCAGCGCACTTGATTTATCCTTGCTAACAAAGAATATTAATGACATAAGAAATGGTCAAAGAACAAAAGTACCTATATTTGACTTGGAAAGTGGTGCTCGGAGTGGTTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTATGCTCTGCATCCTGATATTCGAATATCACTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACATTTGATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCTATGTTCCAGCAGCTTATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGACTTTGACCCTGTGCTATCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACCAAAATGTAACATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTTATTGATATTTATATAAGGCTTCCTGGGATCCCTTCTAATGGACAGTTGAGAGATAGTGATTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCATTGCTGATACGAGAGCCTATCAAAGAAGGGAACTTTATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTAGTACAGTTGCTGGTCTTCTTAATCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTTTAATTGAGGTTGATCATCTACAAGATGTCCCTGGCCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTGGCAGCAGCAGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAGAGTTATCTTGAAATAATTTTGGAAAGACTACCGGCAATAGAAAGAACTTCTGGTGGGATTCATTCTCAGCAATCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGATGCAGCTCTGCTTCAGAATCCTCATCAAGTAGGGTAGTCTCTCCAATCGAAGGGATTATTGAGGAGATGCAATCAAGGATTAAAAGGCTTGAAAGGTGGCTAGCGATAAATACGGTTCTATGGACATTTCTGATGTCTGCTCTTGTTGGTTATTCACTGTATCAAAGGAGGCGTCAATAA 2847 0.3952 MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRDGVDEGNDVDSIDFDTLIKNLEDLTRGNDTSIPEFDYQQKRRVGYKAIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESSDGAFQGNEAQTDNFIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVSMSFETIDVLGETFMVMRGTNRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSQETVIVAPKPIRVTPNLVTGLEDLPQPWTRSPTKSKMEPVVAEWHFISSDSSQPDNSVLDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSALDLSLLTKNINDIRNGQRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNQNVTYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLKLDGSYTTKSYLEIILERLPAIERTSGGIHSQQSARLLEIVEFIQSQGCSSASESSSSRVVSPIEGIIEEMQSRIKRLERWLAINTVLWTFLMSALVGYSLYQRRRQ 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01635 948 Pfam Phosphoribulokinase / Uridine kinase family 65 223 IPR006083 GO:0005524|GO:0016301
Pumo1g01635 948 Pfam Phosphoribulokinase / Uridine kinase family 515 680 IPR006083 GO:0005524|GO:0016301
Pumo1g01635 948 Gene3D - 512 689 IPR027417 -
Pumo1g01635 948 SMART AAA_5 61 211 IPR003593 GO:0016887
Pumo1g01635 948 SMART AAA_5 512 656 IPR003593 GO:0016887
Pumo1g01635 948 SUPERFAMILY CYTH-like phosphatases 705 855 IPR033469 -
Pumo1g01635 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 683 IPR027417 -
Pumo1g01635 948 PRINTS Uridine kinase signature 634 644 - -
Pumo1g01635 948 PRINTS Uridine kinase signature 513 530 - -
Pumo1g01635 948 PRINTS Uridine kinase signature 540 551 - -
Pumo1g01635 948 PANTHER URIDINE KINASE 10 266 - -
Pumo1g01635 948 CDD UMPK_like 64 226 - -
Pumo1g01635 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Pumo1g01635 948 CDD UMPK_like 515 683 - -
Pumo1g01635 948 Gene3D - 63 243 IPR027417 -
Pumo1g01635 948 Gene3D - 698 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01635 Pumo-Chr1 27774012 27791671 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01635 508 671 PRT Gene Family AT1G55810 26.966 3.06e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01635 - - gmx:100778905 1752.64