Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01633 ATGACTAACATGAGATTTCTTAAAATCTATAACTGGTACCACAACAGCTTCAATGTGAACCATCCTAATGGTCTTGTGTCATTGTCCAATAAATTGAGGTACCTTGAGTGGGATGGATGTTTTCTTGAGTCTTTGTTTCCTAACTTTTGTTCTGAACAACTTGTAGAGATTAGAATGCCTAGAAGCAAGCTTAAAAGGCTCTGGGACGGGGTTCAGAATTTTGTCAATTTAAAGAAAATTGACCTTGAAAACTCCCAAAACCTGATCGAGATCCCATACTTATCTAAGGCAAAAAAACTTGACACGATAGATTTAAGAAACTGTAGAATGATTGAAACCCTTAAGATTCATTCAGAATCTCTCAGAGAACTTCATCTCGCTAATTATTCATCTCTCAAGGACATCTCAGTGACATCACAGGGAATAACAAAATTGGAATTATATGGCATTGCTATACGTGCATTGTCATCTTCAATGTTATCTTTCCCAAAGCTTACATATTTGAATTTAAGGGACTGTAGAGAGATTGAAAGCCTTGACCTTCATTCAAAAACTCTCAGAGAACTTTATCTTACAGATTGGTCATCTCTCAAGGACATCTCAGTGACATAA 612 0.3611 MTNMRFLKIYNWYHNSFNVNHPNGLVSLSNKLRYLEWDGCFLESLFPNFCSEQLVEIRMPRSKLKRLWDGVQNFVNLKKIDLENSQNLIEIPYLSKAKKLDTIDLRNCRMIETLKIHSESLRELHLANYSSLKDISVTSQGITKLELYGIAIRALSSSMLSFPKLTYLNLRDCREIESLDLHSKTLRELYLTDWSSLKDISVT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01633 203 SUPERFAMILY L domain-like 8 201 - -
Pumo1g01633 203 Gene3D Ribonuclease Inhibitor 1 203 IPR032675 -
Pumo1g01633 203 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 180 IPR044974 GO:0006952
Pumo1g01633 203 Pfam Leucine Rich Repeat 53 72 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01633 Pumo-Chr1 27671106 27671872 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01633 1 160 WRKY Transcription Factor Family AT5G45050 35.366 8.99e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01633 - - ccaj:109805276 207.994