Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01631 ATGTCTTCTTCGTCTAACCCGCAGTGTATCTACGACGTGTTCCTCAGCTTCAGAGGAGAAGACACGCGCAGGAACTTCGTGTCTCATCTCTACGCTTCCCTCACCAACGCCGGAGTCAACACTTTCCTCGACGACGAGAAGATCGAGAGGGGCGCGCAGCTGGTGACCAAAATATGGCGGGCAATAGAAGGTTCCAGAATCGCCGTCGTCGTTTTGTCCAAATCGTACGCGCAGTCCAGTTGGTGCCTTCACGAGCTGGTGGAGATTATGAAGTGCCACCGCAACACGGGGCAGGTGGTTCTGCCCGTGTTTTACGACGTTGATCCGTCCCACGTGCGGCGCCACAGAGGCGCGTTTGGAGAAGCGTTGGAAGCGCACGCCACCGCGTACCCGAAGGTGTCCAACTTCGTCGGGCTTTGTAAGAGAGCTCTCTTCGAAGCTGCCAATTTGGCAGGCTGGGATGTCAGAAAATGCAGGAATGAGAACAAGGTAGTGAATCAAATTGTTAGTGCTGTTTTGGAAAAACTAGACATTTCAAACTTGTCTATAACAGACTATCCAGTTGGATTGGAATCCCGGGTGCATGACGTGATTCAATTTTTAGAACCAAGATCAACAAGTGTTAGTGTAGTAGGGATATGGGGAATGGGAGGCATAGGGAAAACAACTATTGCCAAAGCCATCTACAATAAAATTCATCGCAATTTCAGCGACAAAAGCTTCCTTGTAAACATTAGAGAAGAGTGGGAGAAAGATAGAGGACAAATTGATTTGCAAGAACAACTTCTCTTAGACATTCTTAAAACGAGAAAGATAAAGGTGCAAAGCGTTGAAAAGGGGAAAGCCATGATCAAGGAAAGACTCTGCAGCAAAAGGGCACTTGTTGTTCTTGATGATGTGAATAAGTCAGAGCAATTGAATGCACTTTGTGGAAATCGTAAGTGGATTGGTGCAGGAAGTGTAATAATTGTTACTACAAGGGACGTGCGTCTACTCAATGTCCTCAAAGTTGACTATGTCCACAGAATGAAGGAAATGGATGAACATGAGTCCCTTGAGCTTTTTAGTTGGTTTGCTTTTAGGGATGCAAATCCAATAGAAGGCTTCACTAGTCTCTCAAAAAATGTGGTTGCTTACTGTGGAGGATTACCACTGGCTCTTGAAGTCCTTGGATCTTATTTATACGAGAGGACAGAAGAAGAGTGGAAAAGTGTGTTGGCAAGACTAGAAAGAATTCCCGATGATCAAATACAAGAGAAACTAAAAATAAGCTTTGATGGTTTAAAGAATCACATGGAGAAGGACATATTTCTTGATATTTGTTGTTTCTTCATAGGTAAGGACAGAGCCTATGTTACACAGATACTCGATGGTTGTGGACTTCATGCTGAAATTGGAATAACAATCTTGATAGAGCGGAGCCTCATAAAAGTTGAAAATAATAACAAGCTTGGAATGCATGCTTTGCTACGAGACATGGGAAGAGAAATTATTCGTGAAAGTTCGCCTGAGAAGCCTGAGAAGCGTAGCCGATTGTGGTTTCACGAGGATGTGCTTGATGTATTGAGAGAAAATACTGGAACAGAGGATATTAAGGGACTGGCCTTGAAGTTAACAAGTAGAGTTTGCTTCAATACCAATACTTTTATGGAAATGAAGAGATTGAGATTGTTACAACTTGATCATGTAGAACTCACCGGAGATTATGGATATATTTCCAGACACCTCAGATGGGTCAATTGGCAAGGTTTTTCTTTAAAATACATACCCAACAGCTTTTATCAGCAAAATCTAGTTGTTCTTGAGTTAAAGCATAATAATCTCAAACAAGTCTGGAAGGAGCCCCAGTTGCTAGTGATGCTAAAAATCCTCAATCTCAGTCATTCCAGGAACTTGACAAGCACTCCTGACTTTTCAAAACTACCAAAACTTGAAAGGCTCATTCTCAGGGATTGTCCAAGTTTGCAAAAGGTACATGAGTCCATTGGAGATCTCCGCAACAAGTTGGAAGAAGATATAGGACAGATGGAATCCTTGACAACTCTAATTGCAGCAAATACTGCTGTTAAACGAGTGCCATTTTCCATAGTGAGATCCAAAAGCATTGGATATATATCTTTATGTGGATTAGAAGGATTAGCACGTGATGTATTTCCATATCTCATTTGGTCTTGGATGTCACCAACAATGGACATTGTATCCCATAGTCACCCATTTGGTTTGATGTCATCATCTTTAGTTTCTGTTAATGTTCAAAAATATAATTTAGGTGAAATATCGCCTGTACTAAGTGACCTTTCAAAACTTAGAAGTGTTTGGGTGGAATGCTGCACAGAGTCTCAACTAACTCAAGAATTACAAAGAATTATGAATGGTATATATGATGTAAATTCCACTGAATTGGAGACAACACAAGATGTGTCAGCATCAGATATCTCTGAGTCAGAGCATTCCTTGAGATCTGTTTTGATTGGTATGGGCAGTTACCACCAAGTTCTCAATACCCTTAGCAAGGGCATATCACAGGGATTGGCCAGAGGGTCTAGTGATTATTCTCTCCTAGATGACAATTATCCACATTGGTTAACCTATAAAGGTGATGGACATTCAGTAATGTTCAATGTGCCTCAAGATAGTGATCGTCACCTCAAGGGAATGACTTTGTGTGTTGTTTATTCTTCAACTCCAGAAAACATGGCAACTGAATATCTCATTAGTGTCTTGATTGCAAATTACACAAAGTGCACTATCCAGATATACAAGCGAGAGACAGCAATGTCCTTTAATGATGAAGAGTGGTTGGGCATAGTATCAAATCTAGGATCTGGTGACTCAGTGGAGATTTTGGTAGCTTCTGGGCATGGATTAAACATCAAGAAGACTGCAGTCTATCTAATATATGGTGAATCACTTAGCATGAAAGTGAAGCACCAAGAATTCAAAATGTATGAGCAGCAAAGGATCAGTGTTGTTGCTTCTTCCTCCAACTCCTCTTCTATGGTGTCTTCTAAAAATTATGATGTTTTTCTAAGCTTTCAAGGGGAAGACACCCGCAAGAACTTCACAAGCCATCTATATAAAGCTTTGAATGAAGAGAAAGTCAAAACCTACATAGATGACCAGCTCAAAAAGGGAGATGGAATCTCACCAACACTCATCAACGCTATCGAAAATTCTCGTATAGCTATTGTCATATTCTCAGAGAACTATGTTTCCTCAAAGTGGTGCTTGGGTGAACTCAGCAAGATTTTGGAATGCCAGAAAGTCCAAGGGCAGATTGTCATACTTGTGTTTTATAACATAGATCCATCTCATGTGAGGAAGCAAATTGGGAGCTATGAGCAAGCCTTTGCAAAACATGGGGGAGATATCAGGGGCAACAAATGGAAAACTGCTCTCACTGAAGCAGCCAATTTAGTTGGGTGGGACTATCAAACATACAGTGAAGTTAAGAAAACCATTGGAATATGGGGCATGGGTGGCATAGGTAAGACCACCCTTGCTACTGCTTTATATGACAAGCACTCTCATAAGTTTGAAGGTCGTTGTTTCGTTGCAAATGCAGGGGAAAAATCAAACAAACTCAAAGATTCTGAGATAAGTAGCCTTCGAGTTCTGGGTGCAAGTCTTCGAAAAAGAAGTGAAGAGGCTTGGGAATGTGAATTGAAAAAACTCCACAGGATTCAGAAAATGGAAGTTCACAATGTATTAAAATTAAGTTATGATGGCATAGATCCTTTTGAAAAGAACATATTTTTGGACATTGCATGCTTATTCAAAGGACAAAGAAGAGATTGGGTAACATGCCTACTGGAAGCTTTTGGTTTCTTTCCAGCATCTAGGATAGAAGTCTTTTTAGATAAAGCTCTCATAACAATTTCATGTGACAATCAGATAGAAATGCATGGCTTGATACAGGAAATGGGTCGGACAATTGTTCATCAAGAATCTAAAGACCCTGGAAGACGAAGTCGATTGTGTAGACCTGAGGAAGTGCATGACACATTGAAACATAACAAGCAAAAATTAACTGGGGATCTAAATTTGAGCTCTGAATCCCTTGCAAAGATGACTAACATGAGATTTCTTAAAATCTATAACTGGTACCACAACAGCTTCAATGTGAACCATCCTAATGGTCTTGTGTCATTGTCCAATAAATTGAGGTACCTTGAGTGGGATGGATGTTGTCTTGAGTCTTTGCCACCTAACTTTTGTTCTGAACAACTTGTAGAGATTAGAATGCCTAGAAGCAAGCTTAAAAGGCTATGGGACGGGGTTCAGAATTTTGTCAATTTAAAGAAAATTGACCTTGAAAACTCCCAAAACCTGATCGAGATCCCATACTTATCTAAGGCAAAAAAACTTGACACGATAGATTTAAGAAACTGTAGAATGATTGAAGCCCTTAAGATTCATTCAGAATCTCTCAGAGAACTTCATCTCGCTAATTATTCATCTCTCAAGGACATCTCAGTGACATCACAGGGAATAACAAAATTGGAATTATATGGCATTGCTATATGTGCATTGTCATCTTCAATGTTATCTTTCCCAAAGCTTACATATTTGAATTTAAGGGACTGTAGAGAGATTGAAAGCCTTAACCTTCATTCAAAAACTCTCAGAGAACTTTATCTTACAGATTGGTCATCTCTCAAGGACATCTCAGTGACATAA 4680 0.403 MSSSSNPQCIYDVFLSFRGEDTRRNFVSHLYASLTNAGVNTFLDDEKIERGAQLVTKIWRAIEGSRIAVVVLSKSYAQSSWCLHELVEIMKCHRNTGQVVLPVFYDVDPSHVRRHRGAFGEALEAHATAYPKVSNFVGLCKRALFEAANLAGWDVRKCRNENKVVNQIVSAVLEKLDISNLSITDYPVGLESRVHDVIQFLEPRSTSVSVVGIWGMGGIGKTTIAKAIYNKIHRNFSDKSFLVNIREEWEKDRGQIDLQEQLLLDILKTRKIKVQSVEKGKAMIKERLCSKRALVVLDDVNKSEQLNALCGNRKWIGAGSVIIVTTRDVRLLNVLKVDYVHRMKEMDEHESLELFSWFAFRDANPIEGFTSLSKNVVAYCGGLPLALEVLGSYLYERTEEEWKSVLARLERIPDDQIQEKLKISFDGLKNHMEKDIFLDICCFFIGKDRAYVTQILDGCGLHAEIGITILIERSLIKVENNNKLGMHALLRDMGREIIRESSPEKPEKRSRLWFHEDVLDVLRENTGTEDIKGLALKLTSRVCFNTNTFMEMKRLRLLQLDHVELTGDYGYISRHLRWVNWQGFSLKYIPNSFYQQNLVVLELKHNNLKQVWKEPQLLVMLKILNLSHSRNLTSTPDFSKLPKLERLILRDCPSLQKVHESIGDLRNKLEEDIGQMESLTTLIAANTAVKRVPFSIVRSKSIGYISLCGLEGLARDVFPYLIWSWMSPTMDIVSHSHPFGLMSSSLVSVNVQKYNLGEISPVLSDLSKLRSVWVECCTESQLTQELQRIMNGIYDVNSTELETTQDVSASDISESEHSLRSVLIGMGSYHQVLNTLSKGISQGLARGSSDYSLLDDNYPHWLTYKGDGHSVMFNVPQDSDRHLKGMTLCVVYSSTPENMATEYLISVLIANYTKCTIQIYKRETAMSFNDEEWLGIVSNLGSGDSVEILVASGHGLNIKKTAVYLIYGESLSMKVKHQEFKMYEQQRISVVASSSNSSSMVSSKNYDVFLSFQGEDTRKNFTSHLYKALNEEKVKTYIDDQLKKGDGISPTLINAIENSRIAIVIFSENYVSSKWCLGELSKILECQKVQGQIVILVFYNIDPSHVRKQIGSYEQAFAKHGGDIRGNKWKTALTEAANLVGWDYQTYSEVKKTIGIWGMGGIGKTTLATALYDKHSHKFEGRCFVANAGEKSNKLKDSEISSLRVLGASLRKRSEEAWECELKKLHRIQKMEVHNVLKLSYDGIDPFEKNIFLDIACLFKGQRRDWVTCLLEAFGFFPASRIEVFLDKALITISCDNQIEMHGLIQEMGRTIVHQESKDPGRRSRLCRPEEVHDTLKHNKQKLTGDLNLSSESLAKMTNMRFLKIYNWYHNSFNVNHPNGLVSLSNKLRYLEWDGCCLESLPPNFCSEQLVEIRMPRSKLKRLWDGVQNFVNLKKIDLENSQNLIEIPYLSKAKKLDTIDLRNCRMIEALKIHSESLRELHLANYSSLKDISVTSQGITKLELYGIAICALSSSMLSFPKLTYLNLRDCREIESLNLHSKTLRELYLTDWSSLKDISVT 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01631 1559 SMART AAA_5 1150 1319 IPR003593 GO:0016887
Pumo1g01631 1559 SMART AAA_5 207 347 IPR003593 GO:0016887
Pumo1g01631 1559 Pfam TIR domain 11 182 IPR000157 GO:0007165
Pumo1g01631 1559 Pfam TIR domain 1005 1142 IPR000157 GO:0007165
Pumo1g01631 1559 Gene3D - 1136 1238 IPR027417 -
Pumo1g01631 1559 SUPERFAMILY Toll/Interleukin receptor TIR domain 996 1142 IPR035897 -
Pumo1g01631 1559 Gene3D - 183 340 IPR027417 -
Pumo1g01631 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Pumo1g01631 1559 Pfam NB-ARC domain 191 413 IPR002182 GO:0043531
Pumo1g01631 1559 SUPERFAMILY "Winged helix" DNA-binding domain 415 522 IPR036390 -
Pumo1g01631 1559 Gene3D - 345 429 IPR042197 -
Pumo1g01631 1559 PRINTS Disease resistance protein signature 380 394 - -
Pumo1g01631 1559 PRINTS Disease resistance protein signature 616 632 - -
Pumo1g01631 1559 PRINTS Disease resistance protein signature 210 225 - -
Pumo1g01631 1559 PRINTS Disease resistance protein signature 287 301 - -
Pumo1g01631 1559 SMART till_3 10 150 IPR000157 GO:0007165
Pumo1g01631 1559 SMART till_3 1005 1139 IPR000157 GO:0007165
Pumo1g01631 1559 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Pumo1g01631 1559 ProSiteProfiles TIR domain profile. 9 176 IPR000157 GO:0007165
Pumo1g01631 1559 FunFam Disease resistance protein (TIR-NBS-LRR class) 1002 1156 - -
Pumo1g01631 1559 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 178 - -
Pumo1g01631 1559 SUPERFAMILY L domain-like 536 783 - -
Pumo1g01631 1559 Gene3D - 5 182 IPR035897 -
Pumo1g01631 1559 Gene3D Ribonuclease Inhibitor 1327 1559 IPR032675 -
Pumo1g01631 1559 SUPERFAMILY L domain-like 1301 1552 - -
Pumo1g01631 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1150 1255 IPR027417 -
Pumo1g01631 1559 Pfam Leucine Rich Repeat 1409 1428 IPR011713 -
Pumo1g01631 1559 Gene3D Ribonuclease Inhibitor 523 822 IPR032675 -
Pumo1g01631 1559 Gene3D - 969 1135 IPR035897 -
Pumo1g01631 1559 ProSiteProfiles TIR domain profile. 1004 1160 IPR000157 GO:0007165
Pumo1g01631 1559 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 795 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01631 Pumo-Chr1 27457873 27504922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01631 11 652 WRKY Transcription Factor Family AT4G12020 28.765 1.12e-69 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01631 - - aprc:113850721 1224.92