Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01590 ATGGAGCCTAATGCCTGCACTATGCATCATTCCCATTGCATAGAGATGGCAATGGAAGTGCACCAAGTTGTTCCACCACCCCACAAGAGCACCCTGCAGAAACTCAAGGGCAGGCTCAAGGAAACTTTCTTCCCTGATGATCCTCTGCGCCAATTCAAGGGACAACCTCTTAAGAGAAAACTAGTTCTTGGAGCTCAATATGTGTTCCCTATTCTCCAATGGGGTCCTAAGTACAACCTCAAACTCTTCAAATCTGACCTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATTCCACAGGGAATCAGTTATGCTAAGCTTGCAAGTCTTCCTCCAATTGTGGGACTTTATTCTAGTTTTGTTCCCCCACTTGTCTATGCTGTTCTTGGAAGCTCAAAGGACCTTGCAGTAGGACCTGTTTCTATTGCTTCTCTTGTGATGGGATCCATGCTGAGGCAGGAAGTGTCTCCCACAGCAGACCCAATTCTGTTTCTTCAGCTAGCTTTCACTTCAACACTATTTGCTGGTCTCTTTCAAGCTTCTCTTGGAATCCTAAGGCTAGGCTTTATAATTGATTTTCTATCTAAGGCCATTCTTATTGGGTTCATGGCTGGAGCTGCTATTATTGTCTCACTGCAACAGCTCAAGAGCCTGCTTGGAATCACACACTTCACTAATCAGATGGGTCTGATTCCTGTTATGACTTCTGTTTTTCACAATACACATGAGTGGTCATGGCAAACAATATTGATGGGGATTTGCTTCCTGGTGCTACTACTATTAGCAAGACACGTTAGCGTAAGGAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTCATCATCTCTACCCTCCTAGTTTTTGCAATTAAGGCTCAAAATCATGGCATCAGTGTGATTGGAAAATTACAACAAGGAATAAATCCTCCGTCATGGAATATGTTGCACTTTCATGGAAGTCACCTAGGCCTAGTTATGAAAACGGGGCTTATCACTGGGATTTTGTCGCTTACTGAAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTCAAAAACTACAAAGTGGATGGAAATAAAGAAATGATGGCAATTGGGTTTATGAATGTGGTTGGCTCATTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGGTCAGCTGTTAACAATAATGCAGGTGCAAAAACAGCTGTGTCAAATGTAGTGATGTCTGTGACAGTCATGGTAACACTCCTTTTTCTCATGCCATTGTTTCAATACACACCAAATGTTGTGTTGGGCGCAATCATAGTCACGGCAGTAATTGGCCTCATTGATCTCCCTGCTGCTTGTAACATTTGGAAGATAGACAAATTCGATTTCCTTGTGATGTTGACTGCTTTCTTCGGTGTTCTTTTTATCTCTGTCCAGGGAGGCCTTGCTTTTGCTGTCGGGTTATCAACTTTCAAGATACTCATGCAAATTACACGGCCGAAAACAATAATGTTGGGGAAGATACCGGGAACAGACATATATAGAAATCTTGATCAATACAAGGAGGCTGTGAAAATACCTGGTTTTCTTATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATCACATATCTCAACGAGAGAACGTTGCGATGGATTGAAGAAGAAGAAGACAACATAAAAGAACAATTAAGCCTTCGATTCTTAATATTGGAAATGTCAGCTGTGAGTGCCGTTGACACAAGTGGAATCTCACTTTTCAAGGAGTTGAAAGCAACGTTGGAAAAGAAGGGTGTTGATCTTGTGTTGGTCAATCCTCTCGCTGAGGTCATAGAAAAGTTGAAAAAAGCAGATGAAGCTAATGATTTCATACGAGCAGATAACCTTTTCTTGACAGTTGGAGAGGCTGTAGCTTCACTTTCATCAACAATGAAGGGCCAATCATCAACCATTACAGAAGGGGCACACACAATTGTGTCATATAATTGA 1977 0.4234 MEPNACTMHHSHCIEMAMEVHQVVPPPHKSTLQKLKGRLKETFFPDDPLRQFKGQPLKRKLVLGAQYVFPILQWGPKYNLKLFKSDLVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSKDLAVGPVSIASLVMGSMLRQEVSPTADPILFLQLAFTSTLFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMTSVFHNTHEWSWQTILMGICFLVLLLLARHVSVRKPKLFWVSAGAPLVSVIISTLLVFAIKAQNHGISVIGKLQQGINPPSWNMLHFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDLPAACNIWKIDKFDFLVMLTAFFGVLFISVQGGLAFAVGLSTFKILMQITRPKTIMLGKIPGTDIYRNLDQYKEAVKIPGFLILSIEAPINFANITYLNERTLRWIEEEEDNIKEQLSLRFLILEMSAVSAVDTSGISLFKELKATLEKKGVDLVLVNPLAEVIEKLKKADEANDFIRADNLFLTVGEAVASLSSTMKGQSSTITEGAHTIVSYN 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01590 658 NCBIfam sulfate permease 70 632 IPR001902 GO:0016020|GO:0055085
Pumo1g01590 658 CDD STAS_SulP_like_sulfate_transporter 515 629 - -
Pumo1g01590 658 ProSiteProfiles STAS domain profile. 514 636 IPR002645 -
Pumo1g01590 658 Gene3D STAS domain 494 639 IPR036513 -
Pumo1g01590 658 FunFam Sulfate transporter 31 494 639 - -
Pumo1g01590 658 SUPERFAMILY SpoIIaa-like 519 636 IPR036513 -
Pumo1g01590 658 PANTHER SULFATE TRANSPORTER 30 639 IPR001902 GO:0016020|GO:0055085
Pumo1g01590 658 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Pumo1g01590 658 Pfam Sulfate permease family 83 463 IPR011547 GO:0016020
Pumo1g01590 658 Pfam STAS domain 515 632 IPR002645 -
Pumo1g01590 658 Coils Coil 603 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01590 Pumo-Chr1 26876014 26882890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01590 15 643 Inorganic Solute Cotransporters AT3G15990 66.719 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01590 K17471 - gmx:100787284 1212.21