Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01589 ATGGAACATAATTCTGATTTCGTGGAAGTAACAATAGACGAAGTGACAATGGACCAAGTACCCAACGAAGTGCACAAAGTTGTTCCACCACCCTACAAGAGCACCCTACAGCAGTTCATCACCAAGGTTAAGGAAACTTTTTTCCCTGATGATCCTCTGCGCCAATTTAAGGGACAACCAGTCAAGAGAAAACTAATCCTTGGAGCTCAATATGTGTTCCCTGTGCTTCAATGGGCTCCTAATTACAGCTTCAAACTCTTTAAATCTGACCTTATTTCTGGTCTAACCATTGCTAGTTTGGCAATCCCCCAGGGAATCAGTTATGCTAACCTTGCAAATCTTCCTGCAATTCTGGGACTATATTCTAGTTTTGTTCCTCCCCTTTTGTATGTTGTTCTTGGAAGCTCAATGGATCTTGCAGTAGGACCTGTTTCTATTACTTCCCTAGTGTTGGGATCTATGCTCACAGAAGAAGTGTTAGGATTTATCATTGATTTTCTATCAAAGGCAACTCTTATTGGGTTCATGGCTGGATCAGCTGTAATTGTAGCTCTGCAACAGCTCAAGGGCCTTCTAGGAATCAAACATTTCACCAAAAAGATGTCCCTGATTCCAGTTTTGAGTTCTGTTTTCAATAATACAGACGAGTGGTCGTGGCAAACAATATTAATGGGGGTTTGCTTCTTGGTGTTTTTACTGGTTGCAAGACACATTAGCATAAGGAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTGATCATCTCTACAGTCATGGCTTTCGTAATCAAGGCTCCACGTCATGGCATCAGTGTGATTGGAAAATTGCCACACGGAGTAAATCCTCCTTCAGTGGATATGCTACTCTTTCAAGGAAGTCATCTGGGTCTAGTCATCAAAACTGGCATTATCACTGGCATTTTATCCCTCACTGAAGGAATTGCAGTGGGAAGGACATTTGCTACTATCAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATCGGGTTCATGAATGTGGTTGGCTCCACCACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCTGCTATCAATCATAATGCAGGTGCTAAAACAGCAATGTCAAACATAGTAATGTCTGTGACCGTCTTGGTGACACTCCTGTTTCTTATGCCATTGTTTCAATACACTCCAAATGTTATATTGGGTGCAATCATGATAACAGCAGTAATTGGCCTCATTGATATTCCTTCTGCTTATCTCATTTGGAAGCTAGACAAATTCGATTTCGTTGTGATGTTGAGTGCATTCTTTGGTGTAATTTTTATCTCTGTCCAGCTTGGCCTCGCCATTGCAGTCGGATTATCAGTTTTCAGGATACTCCTGCAAGTTACAAGGCCTAAAACAGTAATGTTGGGGAACATTCCTGCGACAAACATATATAGAAATATTCATCATTATAAGGAAGCTACAAGAGTACCTGGTTTTCTTATTTTAAGTATTGAGGCTCCCATCAATTTTACAAACATCTCATATCTCAACGAGAGAATATTAAGATGGGTAGAAGATGAAGAAGCTACCATAAAGGATAACTTATGCCTTCAATTTGTGATTCTGGAAATGTCAGCTGTGAGTGCCATAGACACAAGTGGAGTCTCACTTTTCAAGGATTTGAAAACGACATTGACAATTAAGGGTCTTGTGTTGGTGAATCCTCTAGCTGATGTCATAGAAAAGCTGCAAAAAGCCGATGACGCCAATGATTTCGTTCGAGATGATTACCTTTTCTTAACAGTTGGAGAGGCTGTAACTTCACTTTCATCAGCAATGAAGGGCCAATCACCAGCCATGGAAGAAGAGGAGGCACAGACAATTGTGACTGAGTACTAA 1893 0.4105 MEHNSDFVEVTIDEVTMDQVPNEVHKVVPPPYKSTLQQFITKVKETFFPDDPLRQFKGQPVKRKLILGAQYVFPVLQWAPNYSFKLFKSDLISGLTIASLAIPQGISYANLANLPAILGLYSSFVPPLLYVVLGSSMDLAVGPVSITSLVLGSMLTEEVLGFIIDFLSKATLIGFMAGSAVIVALQQLKGLLGIKHFTKKMSLIPVLSSVFNNTDEWSWQTILMGVCFLVFLLVARHISIRKPKLFWVSAGAPLVSVIISTVMAFVIKAPRHGISVIGKLPHGVNPPSVDMLLFQGSHLGLVIKTGIITGILSLTEGIAVGRTFATIRNYKVDGNKEMMAIGFMNVVGSTTSCYVTTGSFSRSAINHNAGAKTAMSNIVMSVTVLVTLLFLMPLFQYTPNVILGAIMITAVIGLIDIPSAYLIWKLDKFDFVVMLSAFFGVIFISVQLGLAIAVGLSVFRILLQVTRPKTVMLGNIPATNIYRNIHHYKEATRVPGFLILSIEAPINFTNISYLNERILRWVEDEEATIKDNLCLQFVILEMSAVSAIDTSGVSLFKDLKTTLTIKGLVLVNPLADVIEKLQKADDANDFVRDDYLFLTVGEAVTSLSSAMKGQSPAMEEEEAQTIVTEY 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01589 630 CDD STAS_SulP_like_sulfate_transporter 488 599 - -
Pumo1g01589 630 FunFam Sulfate transporter 31 467 610 - -
Pumo1g01589 630 ProSiteProfiles STAS domain profile. 487 607 IPR002645 -
Pumo1g01589 630 Pfam Sulfate permease family 160 436 IPR011547 GO:0016020
Pumo1g01589 630 Pfam Sulfate permease family 87 158 IPR011547 GO:0016020
Pumo1g01589 630 SUPERFAMILY SpoIIaa-like 492 607 IPR036513 -
Pumo1g01589 630 Gene3D STAS domain 467 609 IPR036513 -
Pumo1g01589 630 PANTHER SULFATE TRANSPORTER 160 609 IPR001902 GO:0016020|GO:0055085
Pumo1g01589 630 Pfam STAS domain 488 603 IPR002645 -
Pumo1g01589 630 NCBIfam sulfate permease 160 603 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01589 Pumo-Chr1 26863013 26869220 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01589 1 614 Inorganic Solute Cotransporters AT3G15990 59.908 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01589 K17471 - gmx:100779433 1096.26