Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01587 ATGACAAAAGAAAAAGGGTTTCATGTGAGATATGAGGCAACTCTTATTGGGTTCATGGCTGGATCAGCTGTAATTGTAGCTCTGCAACAGCTCAAGGGCCTTCTAGGAATCAAACATTTCACCAAAAAGATGGCCCTGATTCCAGTTTTGAGTTCTGTTTTCAGTAATACAGACGAGTGGTCGTGGCAAACAATATTAATGGGGGTTTGCTTCTTGGTGTTTTTACTGGTTGCAAGACACATTAGCATAAGGAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTGATCATCTCTACCGTCATGGCTTTCGTAATCAAGGCTCCACGTCATGGCATCAGTGTGGAAGGAATTGCAGTGGGAAGGACATTTGCTGCTATCAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATCGGGTTCATGAATGTGGTTGGCTCCACCACATCCTGCTATGTTACAACAGTTTCATGTGCTAAAACAGCAATGTCAAACATAGTAATGTCTGTGACAGTCTTGGTGACACTCCTGTTTCTTATGCCATTGTTTCAATACACTCCAAATGTTATATTGGGTGCAATCATGATAACAGCAGTAATTGGCCTCATTGATATTCCTTCTGCTTATCTCATTTGGAAGCTAGACAAATTCGATTTCGTTGTGATGTTGACTGCATTCTTTGGTGTAATTTTTATCTCTGTCCAGCTTGGCCTCGCCATTGCAGTCGGATTATCAGTTTTCAGGATAGTCCTGCAAGTTACAAGGCCTAAAACAGTAATGTTGGGGAACATTCCTGCGACAAACATATATAGAAATATTCATCATTATAAGGAAGCTACAAGAGTACCTGGTTTTCTTAATTTAAGTATTGAGGCTCCCATCAATTTTGCAAACATCACATATCTCAACGAGAGAATATTAAGATGGGTAGAAGATGAAGAAGCTACCATAAAGGATAACTTATGCCTTCAATTTGTGATTCTGGATATGTCAGCTGTGAGTGCCATAGACACAAGTGGAGTCTCACTTTTCAAGGATTTGAAAACGACATTGACAATTAAGGGTCTTGTGTTGGTGAATCCTCTAGCTGATGTCATAGAAAAGCTGCAAAAAGCCGATGACGCCAATGATTTCGTTCGAGATGATTACCTTTTCTTAACAGTTGGAGAGGCTGTAACTTCACTTTCATCAGCAATGAATGGCCAATCACCAGCCATAGAAGAAGAGGAGGCACAGACAATTGTGACTGAGTACTAA 1275 0.4071 MTKEKGFHVRYEATLIGFMAGSAVIVALQQLKGLLGIKHFTKKMALIPVLSSVFSNTDEWSWQTILMGVCFLVFLLVARHISIRKPKLFWVSAGAPLVSVIISTVMAFVIKAPRHGISVEGIAVGRTFAAIRNYKVDGNKEMMAIGFMNVVGSTTSCYVTTVSCAKTAMSNIVMSVTVLVTLLFLMPLFQYTPNVILGAIMITAVIGLIDIPSAYLIWKLDKFDFVVMLTAFFGVIFISVQLGLAIAVGLSVFRIVLQVTRPKTVMLGNIPATNIYRNIHHYKEATRVPGFLNLSIEAPINFANITYLNERILRWVEDEEATIKDNLCLQFVILDMSAVSAIDTSGVSLFKDLKTTLTIKGLVLVNPLADVIEKLQKADDANDFVRDDYLFLTVGEAVTSLSSAMNGQSPAIEEEEAQTIVTEY 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01587 424 Gene3D STAS domain 261 403 IPR036513 -
Pumo1g01587 424 Pfam Sulfate permease family 119 230 IPR011547 GO:0016020
Pumo1g01587 424 CDD STAS_SulP_like_sulfate_transporter 282 393 - -
Pumo1g01587 424 FunFam Sulfate transporter 31 261 404 - -
Pumo1g01587 424 ProSiteProfiles STAS domain profile. 281 401 IPR002645 -
Pumo1g01587 424 Pfam STAS domain 282 397 IPR002645 -
Pumo1g01587 424 PANTHER SULFATE TRANSPORTER 12 119 IPR001902 GO:0016020|GO:0055085
Pumo1g01587 424 SUPERFAMILY SpoIIaa-like 286 401 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01587 Pumo-Chr1 26739511 26746617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01587 12 402 Inorganic Solute Cotransporters AT1G23090 63.063 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01587 K17471 - gmx:100779433 684.1