Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01586 ATGGCTGGATCAGCTGTAATTGTAGCTCTGCAACAGCTCAAGGGCCTTCTAGGAATCAAACATTTCACCAAAAAGATGACCCTGATTCCAGTTTTGAGTTCTGTTTTCAATAATACAGACGAGGAAGGAATTGCAGTGGAAAGGGCATTTGCTACTATCAGAAATTACAAAGTGGATGGAAATAAGGAAATGATGGCAATCGGGTTCATGAATGTGGTTGGCTCCACCACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCTGCTATCAATCATAATGCAGGTGCTAAAACAGCAATGTCAAACATAGTAATGTCTGTGACAGTCTTGGTGACACTCCAATTTCTTATGCCGTTGTTTCAATACACTCCAAATGTTATATTGGGTGCAATCATGATAACAGCAGTAATTGGCCTCATTGATATTCCTTCTGCTTATCTCATTTGGAAGCTAGACAAATTCGATTTCGTTGTGATGTTGACTGCATTCTTTGGTGTAATTTTTATCTCTGTCCAGCTTGGCCTTGCCATTGCAGTCGGATTATCAGTTTTCAGGATACTCCTGCAAGTTACAAGGCCTAAAACAGTAATGTTGGGGAACATTCCTGCGACAAACATATATAGAAATATTCATCATTATAAGGAAGCTACAAGAGTACCTGGTTTTCTTATTTTAAGTATTGAGGCTCCCATCAATTTTGCAAACATCACATATCTCAACGAGAGAATATTAAGATGGGTAGAAGATGAAGAAGCTACCATAAAGGATAACTTATGCCTTCAATTTGTGATTCTGGAAATGTCAGCTGATGTCATAGAAAAGCTACAAAAAGCCAATGACGCCAATGATTTCGTTCGAGATGATTACCTTTTCTTAACAGTTGGAGAGGCTGTAACTTCACTTTCATCAGCAATGAAGGGCCAATCACCAGCCATGGAAGAAGAGGAGGCACAGACAATTGTGACTGAGTACTAA 978 0.3947 MAGSAVIVALQQLKGLLGIKHFTKKMTLIPVLSSVFNNTDEEGIAVERAFATIRNYKVDGNKEMMAIGFMNVVGSTTSCYVTTGSFSRSAINHNAGAKTAMSNIVMSVTVLVTLQFLMPLFQYTPNVILGAIMITAVIGLIDIPSAYLIWKLDKFDFVVMLTAFFGVIFISVQLGLAIAVGLSVFRILLQVTRPKTVMLGNIPATNIYRNIHHYKEATRVPGFLILSIEAPINFANITYLNERILRWVEDEEATIKDNLCLQFVILEMSADVIEKLQKANDANDFVRDDYLFLTVGEAVTSLSSAMKGQSPAMEEEEAQTIVTEY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01586 325 ProSiteProfiles STAS domain profile. 213 270 IPR002645 -
Pumo1g01586 325 PANTHER SULFATE TRANSPORTER 42 269 IPR001902 GO:0016020|GO:0055085
Pumo1g01586 325 Pfam Sulfate permease family 42 162 IPR011547 GO:0016020
Pumo1g01586 325 Pfam STAS domain 214 270 IPR002645 -
Pumo1g01586 325 Gene3D STAS domain 193 270 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01586 Pumo-Chr1 26616876 26619923 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01586 1 41 Inorganic Solute Cotransporters AT1G23090 70.732 1.55e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01586 K17471 - gmx:100779433 497.278