Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01584 ATGCAGAACTTATGGAAGGCGTGCCCACATGAGAGGATAACGACAGCAAGTGATGTTGGTGGCTGGAAAATAGGCCCTTCTAGAGGGCTAGGATTTATCATTGATTTTATATCAAAGGCAACTCTTATTGGGTTCATGGCTGGATCAGCTGTAATTGTAGCTCTGCAACAGCTCAAGGGCCTTCTAGGAATCAAACATTTCACCAAAAAGATGGCCCTGATTCCAGTTTTGAGTTCTGTTTTCAATAATACAGACGAGTGGTCGTGGCAAACAATATTAATGGGGGTTTGCTTCTTGGTGTTTTTACTGGTTGCAAGACACTTTAGCATAAGGAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTGATCATCTCTGCCATTGTGGCTTTTCATAATCAAGGCTCCATGTCATGGCATCAGTGTGTGGATATGCTACTCTTTCAAGGAAGTCATCTGGGTCTAGTCATCAAAACTGGCATTATCACTGGCATTTTATCCCTCACTGAAGGAATTGCAGTGGGAAGGACATTTGCTACTATCAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATCGGGTTCATGAATGTGGTTGGCTCCACCACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCTGCTATCAATCATAATGCAGGTGCTAAAACAGCAATGTCAAACATAGTAATGTCTGTGACAGTCTTGGTGACACTCCTGTTTCTTATGCCATTGTTTCAATACACTCCAAATGTTATATTGCGTGCAATCATGATAACAGCAGTAATTGGCCTCATTGATATTCCTTCTGCTTATCTCATTTGGAAGCTAGACAAATTCGATTTCATTGTGATGTTGACTGCATTCTTTGGTGTAATTTTTATCTCTGTCCAGCTTGGCCTCGCCATTGCAGTCGAATTATCAGTTTTCAGGATACTCCTGCAAGTTGCAAGGCCTAAAACAGTAATGTTGGGGAACATTCCTGCGACAAACATATATAGAAATATTCATCATTATAAGGAAGCTACAAGAGTACCTGGTTTTCTTATTTTAAGTATTGAGGCTCCCATCAATTTTGCAAACATCACATATCTCAACGAGAGAATATTAAGATGGGTAGAAGATGAAGAAGCTACCATAAAGGATAACTTATGCCTTCAATTTGTGATTCTGGAAATATTTTCAACTGTGAGTGCCATAGACACAAGTGGAGTCTCACTTTTCAAGGATTTGAAAATGACATTGACAATTAAGGGTCTTGTGTTGGTGAATCCTCTAGGTGATGTCATAGAAAAGTTGCAAAAAGCCGATGACGCCAATGATTTCGTTCGAGATGATTACCTTTTCTTAACAGTTGGAGAGGCTGTAACTTCACTTTCATCAGCAATGAAGGGCCAATCACCAGCCATGGAAGAAGAGGAGGCACAGACAATTGTGATTGAGTACTAA 1470 0.4061 MQNLWKACPHERITTASDVGGWKIGPSRGLGFIIDFISKATLIGFMAGSAVIVALQQLKGLLGIKHFTKKMALIPVLSSVFNNTDEWSWQTILMGVCFLVFLLVARHFSIRKPKLFWVSAGAPLVSVIISAIVAFHNQGSMSWHQCVDMLLFQGSHLGLVIKTGIITGILSLTEGIAVGRTFATIRNYKVDGNKEMMAIGFMNVVGSTTSCYVTTGSFSRSAINHNAGAKTAMSNIVMSVTVLVTLLFLMPLFQYTPNVILRAIMITAVIGLIDIPSAYLIWKLDKFDFIVMLTAFFGVIFISVQLGLAIAVELSVFRILLQVARPKTVMLGNIPATNIYRNIHHYKEATRVPGFLILSIEAPINFANITYLNERILRWVEDEEATIKDNLCLQFVILEIFSTVSAIDTSGVSLFKDLKMTLTIKGLVLVNPLGDVIEKLQKADDANDFVRDDYLFLTVGEAVTSLSSAMKGQSPAMEEEEAQTIVIEY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01584 489 SUPERFAMILY SpoIIaa-like 350 466 IPR036513 -
Pumo1g01584 489 Gene3D STAS domain 325 468 IPR036513 -
Pumo1g01584 489 ProSiteProfiles STAS domain profile. 345 466 IPR002645 -
Pumo1g01584 489 Pfam STAS domain 346 462 IPR002645 -
Pumo1g01584 489 PANTHER SULFATE TRANSPORTER 30 468 IPR001902 GO:0016020|GO:0055085
Pumo1g01584 489 CDD STAS_SulP_like_sulfate_transporter 346 458 - -
Pumo1g01584 489 FunFam Sulfate transporter 31 325 469 - -
Pumo1g01584 489 Pfam Sulfate permease family 30 294 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01584 Pumo-Chr1 26495074 26506692 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01584 30 474 Inorganic Solute Cotransporters AT1G23090 66.452 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01584 K17471 - gmx:100779433 763.451