Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01582 ATGTATTTTGTCATTCAGGGAATCAGTTATGCTAACCTTGCAAATCTTCCTGCAATTCTGGGACTATGTGAGCTAGGATTTATCATTGATTTTCTATCAAAGGCAACTCTTATTGGGTTCATGGCTGGATCAGCTGTAATTGTAGCTCTGCAACAGCTCAAGGGCCTTCTAGGAATCAAACATTTCACCAAAAAGATGGCCCTGATTCCAGTTTTGAGTTCTGTTTTCAATAATACAGACGAGTGGTCGTGGCAAACAATATTAATGGGGGTTTGCTTCTTGGTGTTTTTACTGGTTGCAAGACACATTAGCATAAGGAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTGATCATCTCTACCGTTGTGGCTTTCATAATCAAGGCTCCACGTCATGGCATCAGTGTGGAAGGAATTGCAGTGGGAAGGACATTTGCTACTATCAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATCGGGTTCATGAATGTGGTTGGCTCCACCACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCTGCTATCAATCATAATGCAGGTGCTAAAACAGCAATGTCAAACATAGTAATGTCTGTGACCGTCTTGGTGACACTCCTGTTTCTTATGCCATTGTTTCAATACACTCCAAATGTTATATTGGGTGCAATCATGATAACAACAGTAATTGGCCTCATTGATATTCCTTCTGCTTATCTCATTTGGAATCTAGACAAATTCGATTTCGTTGTGATGTTGACTGCATTCTTTGGTGTAATTTTTATCTCTGTCCAGCTTGGCCTCGCCATTGCAGTCGGATTATCAGTTTTCAGGATACTCCTGCAAGTTACAAGGCCTAAAACAGTAATGTTGGGGAACATTCCAGCGACAAACATATATAGAAATATTCATCATTATAAGGAAACTACAAGAGTACCTGGTTTTCTTATTTTAAGTATTGAGGCTCCCATCAATTTTGCAAACATCACATATCTCAACGAGAGAATATTAAGATGGGTAGAAGATGAAGAAGCTACCATAAAGGATAACTTATGCCTTCAATCTGTGATTCTGGATATGTCAGCTGTGAGTGCCATAGACACAAGTGGAGTCTCACTTTTCAAGGATTTGAAAACGACATTGACAATTAAGGGTCTTGTGTTGGTGAATCCTCTAGCTGATGTCATAGAAAAGCTGCAAAAAGCCGATGATGCCAATGATTTCGTTCGAGATGATTACCTTTTCTTAACAGTTGGAGAGGCTGTAACTTCACTTTCATCAGCAATGAAGGGCCAATCACCAGCCATGGAAGAAGAGGAGGCACAGACAATTGTGACTGAGTACTAA 1371 0.4041 MYFVIQGISYANLANLPAILGLCELGFIIDFLSKATLIGFMAGSAVIVALQQLKGLLGIKHFTKKMALIPVLSSVFNNTDEWSWQTILMGVCFLVFLLVARHISIRKPKLFWVSAGAPLVSVIISTVVAFIIKAPRHGISVEGIAVGRTFATIRNYKVDGNKEMMAIGFMNVVGSTTSCYVTTGSFSRSAINHNAGAKTAMSNIVMSVTVLVTLLFLMPLFQYTPNVILGAIMITTVIGLIDIPSAYLIWNLDKFDFVVMLTAFFGVIFISVQLGLAIAVGLSVFRILLQVTRPKTVMLGNIPATNIYRNIHHYKETTRVPGFLILSIEAPINFANITYLNERILRWVEDEEATIKDNLCLQSVILDMSAVSAIDTSGVSLFKDLKTTLTIKGLVLVNPLADVIEKLQKADDANDFVRDDYLFLTVGEAVTSLSSAMKGQSPAMEEEEAQTIVTEY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01582 456 Pfam Sulfate permease family 141 262 IPR011547 GO:0016020
Pumo1g01582 456 SUPERFAMILY SpoIIaa-like 317 433 IPR036513 -
Pumo1g01582 456 PANTHER SULFATE TRANSPORTER 141 435 IPR001902 GO:0016020|GO:0055085
Pumo1g01582 456 Gene3D STAS domain 293 435 IPR036513 -
Pumo1g01582 456 FunFam Sulfate transporter 31 293 436 - -
Pumo1g01582 456 CDD STAS_SulP_like_sulfate_transporter 314 425 - -
Pumo1g01582 456 Pfam STAS domain 314 429 IPR002645 -
Pumo1g01582 456 ProSiteProfiles STAS domain profile. 313 433 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01582 Pumo-Chr1 26255962 26261303 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01582 18 441 Inorganic Solute Cotransporters AT1G23090 64.454 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01582 K17471 - gmx:100779433 750.74