Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01572 ATGCTGTTGAGTTCATTTTGTATCACATGGCCATATTTGTGGTGTTGGGATTCCACCAACTTGCATCCAATTCTAACCATTCTAGTAACCCTGATCAGTGTGCTATGTTTGCTATGGTGGTTCAAGAATTCAAGTAATGAAGCCACTCTTCCATCTCCTTTGCCTCCAGGTCCACTAGGCTTGCCACTTCTTGGGTACCTTCCCTTTCTAGGAACCAATCCCCACCTCAAATTCCACAAGCTTGCACAAGTTTATGGTCCTATCTACAAGCTCATGCTGGGAACCAAAACATTCATTGTGGTTAGTTCACCCTCTCTGGTGAAAGAGATAGTGCGTGACCAAGACACGGTATTTGCCAACCGTGACCCTCCCATTTCCGCAATGGTGGCCTTGTATGGCGGCACTGACATAGCCTCTTTGCCTCATGGTCCACGGTGGAGGAAGGCTCGCAAGATATTGGTGCGCGAGATGCTCAGCAACACCAACATCAGTAACTCTTTCTCTCATAGAAAGGTAGAGGTTAAGAAATCCATCAAAGATGTTTATGAGAAGAAAATAGGGTGCCCCGTAAGTGTTAGTGAGTTGGCTTTTCTAACAGCTACAAATGCAATAATGAGTATGATCTGGGGTGAGACGTTGCAAGGAGAAGAAGGGGCTACTATTGGGGCTAAGTTTAGAGCATTTGTGTCAGAACTTATGGTGTTACTAGGGAAGCCAAATGTTTCGGATCTTTACCCCTCACTTGCATGGTTAGATTTGCAAGGAATTGAGAGAAGAACAAGAAAGGTCTCTCAATGGATTGATAGGCTCTTTGATTCTGCCATTGAAAAGCGAATGAATGTGACGGGAGAGGAAGAAAGTAAGTCAAAGAAGAAAGATTTCCTGCAATATCTGTTGGAGCTTACAAAGAGTGATAGTGATTCAGCATCAATGACCATGAACGAGATCAAGGCCATCCTCTTGGATATAGTGGTGGGTGGAACTGAGACCACATCAACAACATTGGAATGGGTGGTAGCAAGGCTGTTGCAGCATCCTGAGGCAATGAAGAGAGTTCAAGAAGAGTTGGATGAGATAGTAGGATTGGACAATTGTATTGAATTAGAATCACAGTTGTCCAAATTACAGTACTTAGAAGCTGTCATAAAGGAAACACTTCGTTTGCATCCCCCTCTACCCTTTCTGATACCCCGTTGCCCAAGCCAAACTAGCACTGTTGGTGGATACACCATTCCAAAAGGTGCACAAGTAATGTTGAACGTGTGGACTATACACAGGGACCCTGACATTTGGAAAGATGCGTTGGAATTTCGACCAGAGAGGTTTCTGAGTAATGCTGCTGGCAAGTTGGACTACTGGGGCAACAAATTTGAGTATCTTCCTTTTGGATCTGGAAGAAGAATCTGTGCAGGGCTACCTCTTGCTGAGAAGATGATGATGTTTATGCTGGCTTCCTTCTTGCATTCTTTTGAATGGAGATTGCCTAATGGCACAATGCTTGAATTTTCAGGCAAATTTGGTGTTGTTGTCAAGAAAATGAAGCCACTAGTTGTTATTCCGAAGCCTAGACTATCTAAATCAGAACTCTACCAATAA 1596 0.4373 MLLSSFCITWPYLWCWDSTNLHPILTILVTLISVLCLLWWFKNSSNEATLPSPLPPGPLGLPLLGYLPFLGTNPHLKFHKLAQVYGPIYKLMLGTKTFIVVSSPSLVKEIVRDQDTVFANRDPPISAMVALYGGTDIASLPHGPRWRKARKILVREMLSNTNISNSFSHRKVEVKKSIKDVYEKKIGCPVSVSELAFLTATNAIMSMIWGETLQGEEGATIGAKFRAFVSELMVLLGKPNVSDLYPSLAWLDLQGIERRTRKVSQWIDRLFDSAIEKRMNVTGEEESKSKKKDFLQYLLELTKSDSDSASMTMNEIKAILLDIVVGGTETTSTTLEWVVARLLQHPEAMKRVQEELDEIVGLDNCIELESQLSKLQYLEAVIKETLRLHPPLPFLIPRCPSQTSTVGGYTIPKGAQVMLNVWTIHRDPDIWKDALEFRPERFLSNAAGKLDYWGNKFEYLPFGSGRRICAGLPLAEKMMMFMLASFLHSFEWRLPNGTMLEFSGKFGVVVKKMKPLVVIPKPRLSKSELYQ 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01572 531 SUPERFAMILY Cytochrome P450 55 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 CDD CYP76-like 82 520 - -
Pumo1g01572 531 Pfam Cytochrome P450 55 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Pumo1g01572 531 Gene3D Cytochrome P450 50 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PANTHER OS08G0547900 PROTEIN 18 531 - -
Pumo1g01572 531 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01572 531 FunFam Putative cytochrome P450 superfamily protein 316 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01572 Pumo-Chr1 25806546 25809054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01572 13 530 Cytochrome P450 AT4G12320 45.594 3.51e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01572 - - gmx:100785686 958.747