Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01564 ATGGAAGAAATCGGAGGAAACTTCCAAAGCGATACTAGCTTTTGTGGTTCTCCTGCGGTAGTTCAAGTTATACAAAAGGTAATTGCAGAGTTGATAGGGACATATTTCTTAGTATTTGCAGGGTGTTGCTCTGTGGTTCTTAATAATGCAGAAGAGACTAAAGGAACAATAACGTTTCCTGGAATTTGCGTGGTGTGGGGTTTAACCGTGACCATCTTGGTTTATTCTCTTGCTCACGTCTCTGGTGCTCATTTCAATCCTGCAGTCACTGTCAGCTTTGCTATATATCGCCATTTCCCTTTGAAACTGGCATGCCACTCATCACTACATCTCTTTTACTGCATTTCAATTGGTTTAATATTAGTGCCTCTGTATTTTATTGCGCAAGTACTAGGGTCTTTCCTTGCTAGTGGGACATTGTACCTTCTCTTTGAAGTAGACGATAAATCTTATTTTGGAACAGTACCAGCAGGACCTCAAATTCAATCTCTTGTTTTTGAGATACTTGCATCGTTTCTCTTGATGTTTGTTGTCTCTGCAGTTTCCACGGACAAGAGAGCGATTGGAAAATTGGGAGGGATTGCTGTTGGAATGACAATCATAGTAGACGTCTTCATTGCTGGACCTGTGTCAGGAGCATCTATGAACCCAGCTAGAAGCCTTGGGCCTGCATTGGTGATGCGAGTTTACAAAGGATTTTGGATTTATATAGTTGGACCATTTGTTGGTGCCTTACTAGGTGCCACATGCTACAACTTGATTAGACATACTGACAAACCACTCAGAGAAATTGGCACAAGCTCAAAATTATTTAAAATTGCATCCAGATCATAA 834 0.4089 MEEIGGNFQSDTSFCGSPAVVQVIQKVIAELIGTYFLVFAGCCSVVLNNAEETKGTITFPGICVVWGLTVTILVYSLAHVSGAHFNPAVTVSFAIYRHFPLKLACHSSLHLFYCISIGLILVPLYFIAQVLGSFLASGTLYLLFEVDDKSYFGTVPAGPQIQSLVFEILASFLLMFVVSAVSTDKRAIGKLGGIAVGMTIIVDVFIAGPVSGASMNPARSLGPALVMRVYKGFWIYIVGPFVGALLGATCYNLIRHTDKPLREIGTSSKLFKIASRS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01564 277 PANTHER AQUAPORIN NIP2-1 15 263 IPR034294 -
Pumo1g01564 277 Pfam Major intrinsic protein 21 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo1g01564 277 Pfam Major intrinsic protein 112 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo1g01564 277 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Pumo1g01564 277 Gene3D Glycerol uptake facilitator protein. 8 264 IPR023271 -
Pumo1g01564 277 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo1g01564 277 PRINTS Major intrinsic protein family signature 25 44 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo1g01564 277 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo1g01564 277 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo1g01564 277 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo1g01564 277 SUPERFAMILY Aquaporin-like 22 262 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01564 Pumo-Chr1 25667918 25670714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01564 11 277 Major Intrinsic Protein MIP AT5G37810 57.303 4.44e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01564 K09874 - gmx:100819179 439.113