Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01558 ATGGAAGCTCGTGGAGAAGGGTGTTCTAGTTACTATAACGTTCTTGGTGTTAGTGCGGATTCTAACGTGGATGAGATAAAGCGTGCTTATAGGAAGCTTGCTATGCAATGGCATCCGGATAAGTGGACAAGGACTCCTTCTTTGTTGGGTGAAGCTAAGCGCAAATTCCAGCAAATTCAAGAAGCCTATTCAGTGTTGTCTGATCGTAAGAAAAGAACTATGTATGATGCGGGCCTGTATGATCCTCAAGAGGAAGAGGATGAGGACTTTTCTGATTTTCTGGAAGAAATGTTATCTCTTATGGCTCAAGTGAGGAGAGAGGGAAAGCATTATGGTTTGGAAGAGTTGCAGGGCATGTTCATGGAAATGGCTAAAGGATTTGAGTCTCCTTCAATGTACTGTGGGGTGCCCTCTGTGATTGATGAGTCTAGGTGCTTTAAGAGGACGCGTTTTGACACAAGCATGATGGAGAATAAGGGGTCACATTTTCAAGTACCTGATCTTAACCTCTATTGCAGTTAA 522 0.433 MEARGEGCSSYYNVLGVSADSNVDEIKRAYRKLAMQWHPDKWTRTPSLLGEAKRKFQQIQEAYSVLSDRKKRTMYDAGLYDPQEEEDEDFSDFLEEMLSLMAQVRREGKHYGLEELQGMFMEMAKGFESPSMYCGVPSVIDESRCFKRTRFDTSMMENKGSHFQVPDLNLYCS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01558 173 CDD DnaJ 11 68 IPR001623 -
Pumo1g01558 173 ProSiteProfiles dnaJ domain profile. 10 79 IPR001623 -
Pumo1g01558 173 Gene3D DnaJ domain 8 127 IPR036869 -
Pumo1g01558 173 PRINTS DnaJ domain signature 51 71 IPR001623 -
Pumo1g01558 173 PRINTS DnaJ domain signature 12 30 IPR001623 -
Pumo1g01558 173 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pumo1g01558 173 PANTHER PUTATIVE, EXPRESSED-RELATED 5 132 - -
Pumo1g01558 173 SMART dnaj_3 9 71 IPR001623 -
Pumo1g01558 173 SUPERFAMILY Chaperone J-domain 8 82 IPR036869 -
Pumo1g01558 173 ProSitePatterns Nt-dnaJ domain signature. 56 75 IPR018253 -
Pumo1g01558 173 Pfam DnaJ domain 11 76 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01558 Pumo-Chr1 25600127 25602266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01558 11 77 C2H2 Transcription Factor Family AT1G74250 48.529 5.84e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01558 - - gmx:100306079 309.686