Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01544 ATGGTTTTATTTAAGCAATTAGCATCACTTTCAACACTCCTCATCACCCTATTCCTTCTTTGCCACCTTCTCTTAGTAGATTCCCAAATCCTTCAAACTCCATCACCACCACCCGATTCATCAACCCCACTACTCCCCGACATTTTAACCTTCATAGACCAGAGGCTCGCTCAGGTCTTCCCAATTATCCAAACCTTCAAAAACACAATAACCTCAGACCCTCTCGGAGTAACAGCAACATGGGTTGGTCCAAACCTGTGCAACTACACAGGCTTCTATTGCGACAACCCACCAGACAACCTCACTGCCACAACCATTGCCTCCATCGACTTCAACGGCTTCCAACTCGCCGCTCCGACACTCGATGGCTTCATCGACCAACTCCCCGACCTCGCTCTTTTCCATGCCAACTCGAACAAATTTTCCGGCACCATATCGCCGAAAATAGCAACACTCAAATCCCTCTACGAACTCGATTTAAGTAACAACTTGCTCTCTGGGGTGTTCCCCACATCGGTCCTAAACATCCCCACCTTGTCCTTTTTGGACATTAGGTACAACCTCTTCACCGGCACTGTGCCGCCGCAAATTTTCATGCAAACGTTGGATGTTCTTTTCCTCAACAACAACAATTTCATGCTTACACTTCCCAACAACCTAGGCAACACCCCGGTTGTTTATCTAACGTTAGCGAACAACAAATTCACTGGTACAATTCCTCGCAGCATCGGCAAAGCCTCGTCAACATTGGTTGAAGTGCTGCTATTGAACAACCTTTTAACGGGTTGTCTTCCCTACGAAATCGGGTTCTTGGGAAACCTAACATTGTTCGATGTTGGTGGGAACCTCTTGACTGGGCCAATACCGTGGTCCTTCGGGTGCTTGAAGAAAGTGGAGCAGCTGAACCTGGCTAGGAACTTTTTCTATGGACAGGTTCCGGAAGTGGTGTGTGCGTTGGGGAATTTGGCGAATCTTTCGTTGTCTTATAACTATTTTACCAAAGTGGGACCCTTGTGCAAGAGGCTGATACAAAGGGGGGTTCTTGATGTGAGGAAGAACTGTATTTTCGGTCTTCCGGATCAGAGATCGCTGGGGGAGTGTATGGCGTTCTCTTTGATTCCAAAATCTTGTTCTCACCCTGCTTCGTTTAATATCATACCATGTCAGATTCATCATTGGACGAAACCGCAAGAGAGAACTAAGAGGCATTTGCTGTCATATTCTGCTCTTTCAAGAAATAGAGTAGTTTTGTAA 1254 0.4641 MVLFKQLASLSTLLITLFLLCHLLLVDSQILQTPSPPPDSSTPLLPDILTFIDQRLAQVFPIIQTFKNTITSDPLGVTATWVGPNLCNYTGFYCDNPPDNLTATTIASIDFNGFQLAAPTLDGFIDQLPDLALFHANSNKFSGTISPKIATLKSLYELDLSNNLLSGVFPTSVLNIPTLSFLDIRYNLFTGTVPPQIFMQTLDVLFLNNNNFMLTLPNNLGNTPVVYLTLANNKFTGTIPRSIGKASSTLVEVLLLNNLLTGCLPYEIGFLGNLTLFDVGGNLLTGPIPWSFGCLKKVEQLNLARNFFYGQVPEVVCALGNLANLSLSYNYFTKVGPLCKRLIQRGVLDVRKNCIFGLPDQRSLGECMAFSLIPKSCSHPASFNIIPCQIHHWTKPQERTKRHLLSYSALSRNRVVL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01544 417 SUPERFAMILY L domain-like 66 357 - -
Pumo1g01544 417 Gene3D Ribonuclease Inhibitor 62 223 IPR032675 -
Pumo1g01544 417 Gene3D Ribonuclease Inhibitor 224 416 IPR032675 -
Pumo1g01544 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 18 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01544 Pumo-Chr1 25404158 25405593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01544 49 370 Leucine-rich Repeat extension Gene Families AT3G24480 46.584 7.96e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01544 - - gmx:100813314 701.049