Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01528 ATGGCAGAACAAAACCAAACAACCGAAGCTGGAAGGCACCAAGAGGTTGGTCACAAGAGCCTTCTCCAGAGTGATGCTCTTTACCAGTATATTCTGGAGACCAGTGTCTACCCAAGAGAACCTGAAGCCATGAAAGAATTGAGAGAGTTGACAGCAAAACACCCATGGAACATCATGACAACCTCTGCAGACGAAGGGCAATTCTTGAACATGCTCCTTAAGCTTATCAATGCCAAGAACACCATGGAAATTGGTGTCTACACTGGGTATTCACTGCTTGCCACAGCCCTCGCTCTTCCTGAAGATGGAAAGATCTTGGCCATGGACATTAACAGGGAGAATTATGAATTGGGTTTGCCTGTAATTAAAAAAGCTGGTGTTGACCACAAAATTGAATTCAGAGAAGGTCCTGCTCTCCCAGTTCTCGATGAAATGATTAAAGACGAGAAGAACCATGGGAGCTATGATTTCATCTTTGTGGATGCGGACAAGGACAATTACATCAACTACCACAAGAGGTTGATAGATCTTGTCAAAGTTGGAGGCGTGATCGGGTACGACAACACCCTATGGAACGGATCTGTGGTGGCACCCCCTGATGCTCCTCTCAGGAAGTATGTTAGGTACTACAGGGACTTCGTGCTGGAGCTCAACAAGGCATTGGCTGCGGACCCCAGGATCGAAATTTGCATGCTCCCGGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAAGTGA 738 0.4702 MAEQNQTTEAGRHQEVGHKSLLQSDALYQYILETSVYPREPEAMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIKKAGVDHKIEFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01528 245 FunFam Caffeoyl-CoA O-methyltransferase 1 13 245 - -
Pumo1g01528 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 243 IPR029063 -
Pumo1g01528 245 Pfam O-methyltransferase 33 244 IPR002935 GO:0008171
Pumo1g01528 245 PANTHER O-METHYLTRANSFERASE-RELATED 18 244 - -
Pumo1g01528 245 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 20 244 IPR002935 GO:0008171
Pumo1g01528 245 Gene3D Vaccinia Virus protein VP39 19 245 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01528 Pumo-Chr1 25111047 25113016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01528 2 244 Monolignol Biosynthesis Gene Families AT4G34050 89.300 1.32e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01528 K00588 - gmx:100779260 486.108