Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01504 ATGGAGAATATCATTGCCATTTTCTTTTGCATTTTTCTCTTCTTCTCATCCCTTCTTTCGTATCCATTAATAAAGAAACACAAGAAACATGAACGCATAGCTAAGCCTAAGCTTCCCCCTGGCTCAATGGGTTGGCCTTACGTAGGAGAGACCCTTCAACTCTATTCTCAAGACCCTAACATCTTCTTTGCTTCAAAGCAAAAAAGATATGGAGAAATTTTTAAGACACACATACTAAGTTGTCCATGCGTGATGTTGGCGAGTCCTGAGGCTGCACGTTTTGTGTTGGTGACTCATGCTCACTTGTTCAAGCCAACATACCCCAAGAGCAAGGAGAAGCTAATAGGCCATTCAGCATTGTTCTTTCACCAAGGGGACTACCACACTCGCATCAGAAAACTGGTGCAAACCTCTCTCTCTCCTGAAACCATCAAAAAACTGATTCCAGACATCGAAACCGAAGTCGTTTCCTCCTTGGAATCGTGGGTTTCCGCTGGACAAGCCATTAACGCTTTCCAAGAAATGAAAAAGTTCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGTCACTTGGAAGACAATTATAGAGACCAGCTTAAGGAAAACTACTGCATAGTAGAGAAAGGGTACAATTCTTTCCCTAACAGGATACCCGGAACTGCATACTCCAAAGCACTCTTGGCAAGGAGGAGAATCAGAGAGATTATAAGTGAGATCATTTGTAAAAGAAAGGAGCAGAGATTGGTGGAGAGGGATCTATTAGGTCACTTGCTGAACTACAAGGATGAAAAAGGACAAACGCTAAGTGATGACCAAATTGCTGATAATGTAATTGGGGTACTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACCTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGAGCAAATGGCAGTATATGAAGCTAATGAAGGAGGGAAGATGCCATTGACATGGGGTCAGACCAGAAATATGCCAATTACTCATAGGGTGATTTTGGAAAGCCTTAGGATGTCAAGTATCATATCATTTACTTTTAGGGAAGCTGTGGTTGATGTAGTCTACAAAGGATATCTTATACCGAAGGGTTGGAAAGTCATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCACCCTTCTCCTCACAATTTTGACCCATCAAGGTTTGAGGTTGCTCCAAAGCCCAATACATTTATGCCATTTGGCAACGGAGTGCACTCTTGTCCAGGAAATGAGCTTGCCAAATTGAACATGTTCATTTTAATTCATCATCTAGTAACCAAATATAGGTGGGAAGTAGTGGGATATCAGAACGGAATCCAATATAGCCCATTCCCAGTCCCACTGCATGGTCTACCTACAAGATTTTGGAGAAACGAATAG 1419 0.4172 MENIIAIFFCIFLFFSSLLSYPLIKKHKKHERIAKPKLPPGSMGWPYVGETLQLYSQDPNIFFASKQKRYGEIFKTHILSCPCVMLASPEAARFVLVTHAHLFKPTYPKSKEKLIGHSALFFHQGDYHTRIRKLVQTSLSPETIKKLIPDIETEVVSSLESWVSAGQAINAFQEMKKFSFNIGILSVFGHLEDNYRDQLKENYCIVEKGYNSFPNRIPGTAYSKALLARRRIREIISEIICKRKEQRLVERDLLGHLLNYKDEKGQTLSDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVYEANEGGKMPLTWGQTRNMPITHRVILESLRMSSIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFHPSPHNFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNMFILIHHLVTKYRWEVVGYQNGIQYSPFPVPLHGLPTRFWRNE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01504 472 PANTHER CYTOCHROME P450 26 36 458 - -
Pumo1g01504 472 Pfam Cytochrome P450 39 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 Gene3D Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 SUPERFAMILY Cytochrome P450 34 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Pumo1g01504 472 FunFam Abscisic acid 8 27 470 - -
Pumo1g01504 472 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS E-class P450 group I signature 339 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g01504 472 CDD CYP90-like 67 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01504 Pumo-Chr1 24579642 24583369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01504 7 471 Cytochrome P450 AT3G19270 70.236 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01504 K09843 - gmx:100806350 889.026