Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01489 ATGGGTGAGTGTAAACGCTGCGCTCTCACAATCATTGCGGCCATGGAAGAAGAAGCTTCTAATTCAAGCGAACATTCCATTTCCAAAAAAAGAAAAACCACCGCTTCTGTTAATTCCGCTTCCTTCGAGCTACGCTCTTCTTCCGACACAACCGTCACGCCGGAAGCTTCCGTCAACTCCGCCGGCACGGTTGTTTCCGGTGAATTCTGCTCCGATTGCTCTTGCTCCAGCTCCAGCCACGTTAAGGAGCTCCACACCGCGCCGTTAGATCTGCAGACCAAGGGTTTCGAAACGGTAGACTCAACCGACCGCAATTTCAAATCGTTCAGATTGTTGAGTGAGTTTTCCGGAGACTCGGAAGAATCGACGAAGTCTTCCGCGGCGGTGCGGAAAGTGAAGACACCACCACAGGCGGAGATCGATGAGTTTTTCGCGATGGCGGAAAAGTACGAGCAAAAGCGGTTCGTGGAGAAGTACAACTTTGATATTGTTAGAGATTTGCCGTTGGAGGGTCGCTACCAGTGGGTTCGTTTACATTGA 540 0.5074 MGECKRCALTIIAAMEEEASNSSEHSISKKRKTTASVNSASFELRSSSDTTVTPEASVNSAGTVVSGEFCSDCSCSSSSHVKELHTAPLDLQTKGFETVDSTDRNFKSFRLLSEFSGDSEESTKSSAAVRKVKTPPQAEIDEFFAMAEKYEQKRFVEKYNFDIVRDLPLEGRYQWVRLH 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01489 179 MobiDBLite consensus disorder prediction 32 55 - -
Pumo1g01489 179 Gene3D p27 115 179 IPR044898 -
Pumo1g01489 179 PIRSF CKI_KRP_plant 5 179 IPR044275 GO:0004861|GO:0045736|GO:0051726
Pumo1g01489 179 Pfam Cyclin-dependent kinase inhibitor 135 178 IPR003175 GO:0004861|GO:0005634|GO:0051726
Pumo1g01489 179 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 24 178 IPR044275 GO:0004861|GO:0045736|GO:0051726
Pumo1g01489 179 MobiDBLite consensus disorder prediction 18 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01489 Pumo-Chr1 24391603 24392827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01489 134 178 Core Cell Cycle Gene Families AT1G49620 73.333 1.70e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01489 - - vun:114176886 253.447