Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01486 ATGGCAGCAAAAGAAAACCAGATACTCCTGGAGTTCCCCTTTTTACGTGTTTACAAAGACGGCACTGTGGAGATTTTCAAACCCCCCAACCCCGCCGAAAAGATTCCCCCTTTGGATGACCCCACCACCGGTGTTCGCTCCAAAGACGCAGTCGTATCCACCCACCCACCGGTCTCGTACGATGTGATGTGGATGTACATGTGTCCGGGGAACGAGGGTTCGGAGGATCCTAGGATTAAGCCGGCTGCAGAGGATCTGGCTCGGCTTGGGTGTGAGAGGGTGCTGGTGTTTGTGGCTGAGAAGGACCATATGTTCCACCCTGGAAGGAACTATGTTGAGGACCTTAAGAAGAGTGGGTGGGGTGGGAGTGTTGAGCTTGTTGTCAATTGGGGTTTGAGACATGGCTTTCATGTTATGAACCCTCAACATGACAAGGTTCCCGAATTGTTGCAAAAGATCGTTTCCTTCATCAAACAAGACTAG 483 0.5114 MAAKENQILLEFPFLRVYKDGTVEIFKPPNPAEKIPPLDDPTTGVRSKDAVVSTHPPVSYDVMWMYMCPGNEGSEDPRIKPAAEDLARLGCERVLVFVAEKDHMFHPGRNYVEDLKKSGWGGSVELVVNWGLRHGFHVMNPQHDKVPELLQKIVSFIKQD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01486 160 Gene3D alpha/beta hydrolase 34 160 IPR029058 -
Pumo1g01486 160 Pfam alpha/beta hydrolase fold 56 137 IPR013094 GO:0016787
Pumo1g01486 160 MobiDBLite consensus disorder prediction 29 50 - -
Pumo1g01486 160 SUPERFAMILY alpha/beta-Hydrolases 54 159 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01486 Pumo-Chr1 24254500 24255414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01486 63 160 Carbohydrate Esterase AT3G48700 40.777 9.42e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01486 - - gmx:100806608 168.703