Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01473 ATGACTTTCTTCTTCTTGTGTTTGCTTTTTACCTTGGTTCCTCTTGTTCATATGTATCCCTCGTATCCTCCCTATAGTAGAAATTACCAGCTTGACATCAATTTCTATGATAAATCATGCCCCGATTTGCTCATGATTGTTAGATATGGTGTTTGGGCAGCCTTAAGAAATGACGACAGAATGGCCGCGTCCCTCCTTCGGTTGCACTTTCACGATTGCATAGTAAATGGTTGTGATGCTTCTGTGCTTCTTGATGATACACCATATTTCACGGGCGAAAAGAATGCTCTTCCTAATCACAATTCACTTCGGGGGTTTGAAGTCATTGATGACATAAAAGAACATGTTGAAATGATATGTCCATCAACAGTTTCCTGCGCTGATATATTAGCCTTAGCAGCTAGGGAAGCTATTGATCAGATTGGAGGGCCTTCTTGGCCTGTTGCATTAGGCCGAAGAGATGCAACAACAGCCAGTAAGGAAGCAGCTGAGCAACAACTTCCCTCACCAATTGAGCCTCTAGAAAACATCACTGCAAAGTTTTTCTCCAAAGGTCTTGACATGAAGGATGTTGTAGCCCTTTCAGGAGCACACACAATTGGTTTTGCCCGATGCTTCACCTTCAAAGGAAGACTTTTTGACTTTCAAGGCTCTGGCAGACCTGATCCCGTGCTTGACTTTTCACTTCTCTCAAAACTGCAAAGCACGTGTCCAAATGAAGACTCTTCAAACAGCAACCTAGCACCTCTTGATGCTACAAGTACTATGATGTTTGACAATGAGTATTATAGAAATATCGTATACAACACAGCGCTTCTAGAATCTGACCAAGCACTAATTAAGGATCGAAGGACTGCTCCAATGGTTTATAAATACAGCAGCAACCGGTTTTCCTTCTATGATGATTTTGCTCAATCCATGGCGAAGCTTAGTAATGTAGGAGTGCTTACAGGAACAGAAGGGCAAATTAGATATAAATGTGGCTCTGTAAACTATTATTAA 1002 0.4162 MTFFFLCLLFTLVPLVHMYPSYPPYSRNYQLDINFYDKSCPDLLMIVRYGVWAALRNDDRMAASLLRLHFHDCIVNGCDASVLLDDTPYFTGEKNALPNHNSLRGFEVIDDIKEHVEMICPSTVSCADILALAAREAIDQIGGPSWPVALGRRDATTASKEAAEQQLPSPIEPLENITAKFFSKGLDMKDVVALSGAHTIGFARCFTFKGRLFDFQGSGRPDPVLDFSLLSKLQSTCPNEDSSNSNLAPLDATSTMMFDNEYYRNIVYNTALLESDQALIKDRRTAPMVYKYSSNRFSFYDDFAQSMAKLSNVGVLTGTEGQIRYKCGSVNYY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01473 333 ProSiteProfiles Plant heme peroxidase family profile. 30 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 FunFam Peroxidase 168 310 - -
Pumo1g01473 333 CDD secretory_peroxidase 30 330 IPR033905 GO:0004601|GO:0042744
Pumo1g01473 333 Gene3D - 34 331 - -
Pumo1g01473 333 SUPERFAMILY Heme-dependent peroxidases 30 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 Gene3D Peroxidase, domain 2 168 310 - -
Pumo1g01473 333 FunFam Peroxidase 34 179 - -
Pumo1g01473 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Pumo1g01473 333 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Pumo1g01473 333 PANTHER PEROXIDASE 72-RELATED 29 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 Pfam Peroxidase 51 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01473 333 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01473 Pumo-Chr1 24120074 24123560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01473 30 328 Peroxidase AT1G49570 63.123 1.57e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01473 K00430 - gmx:100805171 606.29