Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01472 ATGGCTTGTAGACTTGTCAAATACTTCACTTTCATCTTCTGTTTGCTTGTTACCTTCATTCCTCTTCTTGTTAATAGTAATAACCAGCTTGACACCAATTTCTATGATGGATCATGCCCCAATTTGACCACGATTGTTAGATATGGTGTTTGGTCAGCCATAAAAAATGACAACAGAATGGCAGCGTCCCTCCTTCGGTTGCACTTTCACGATTGCATAGTAAATGGCTGTGATGCTTCTGTGCTTCTTGATGATACACCATATTTCACGGGCGAACAAAATGCTGCCCCTAATCGCAATTCACTTCGTGGGTTAAATGTGATTGATGATATAAAAGAACAAGTTGAAAGGCAATGTCCATACACAGTTTCCTGCGCTGATATCTTATCCTTAGCAGTTAGGGAAGCTATTGATCTGATTGGAGGGCCTTCTTGGTCTGTTGCATTAGGCCGAAGAGATGCAACAACAGCCAGTCAGGAAGCAGCTAATCAACACATTCCCTCACCGTTCGAGCCTCTAGATAACATCATTGCAAAGTTTACTTCAAAGGGTCTTAACGTGAGGGATGTTGTAGCCCTTTCAGGAGCACATACAATTGGCTATGCCCGATGCTTAACCTTCAAAAGGAGACTTTTTGACTTTCAAGGCTCTGGCAGACCTGATCCCATGCTTGATTTTTCACTTTTCGTAAGATTGCAAAGTAAGTGTCCAAATAATGACGCTTCAAACAGCAATATAGCTCCTCTGGATGCTGCAACTATTTTGACGTTCGACAATGAGTATTATAGAAATCTCTTAAGCAAAACAGGGCTTCTAGAATCTGACCAAGCACTGATTCGGGATCCAAGGACTGCTTCTATGGCTTATTCTTACAGCACCGACCAATCTTCCTTCTATAATGACTTTGCTGCATCCATGGTGAAGCTTAGTAATGTTGGAGTACTTACAGGAACACAAGGGCAAATTAGAAAGAAATGTGGCTCTGTAAACTATTATTAA 999 0.4134 MACRLVKYFTFIFCLLVTFIPLLVNSNNQLDTNFYDGSCPNLTTIVRYGVWSAIKNDNRMAASLLRLHFHDCIVNGCDASVLLDDTPYFTGEQNAAPNRNSLRGLNVIDDIKEQVERQCPYTVSCADILSLAVREAIDLIGGPSWSVALGRRDATTASQEAANQHIPSPFEPLDNIIAKFTSKGLNVRDVVALSGAHTIGYARCLTFKRRLFDFQGSGRPDPMLDFSLFVRLQSKCPNNDASNSNIAPLDAATILTFDNEYYRNLLSKTGLLESDQALIRDPRTASMAYSYSTDQSSFYNDFAASMVKLSNVGVLTGTQGQIRKKCGSVNYY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01472 332 ProSiteProfiles Plant heme peroxidase family profile. 29 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 Pfam Peroxidase 50 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 FunFam Peroxidase 167 309 - -
Pumo1g01472 332 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 FunFam Peroxidase 33 175 - -
Pumo1g01472 332 SUPERFAMILY Heme-dependent peroxidases 29 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 Gene3D - 33 330 - -
Pumo1g01472 332 CDD secretory_peroxidase 29 329 IPR033905 GO:0004601|GO:0042744
Pumo1g01472 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Pumo1g01472 332 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Pumo1g01472 332 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g01472 332 Gene3D Peroxidase, domain 2 167 309 - -
Pumo1g01472 332 PANTHER PEROXIDASE 72-RELATED 27 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01472 Pumo-Chr1 24113192 24116108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01472 28 327 Peroxidase AT1G49570 59.272 2.08e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01472 K00430 - gmx:100805712 558.91