Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01457 ATGGCATCAAATAGCCACTCACCGCCTCTCGAGATATTAGTTCGAGGACCAGAGGATTTCTCGCTCTGGACCGGACCCCCCTTTGCGAACGGTCAACCAAGCGTCAAGCTCGAGAAAGTGAACTGCGTGAACGCCAAGTTCAGCGACGATGGATCCAAACTCATGGTCACGAAATCGAACTCGCTGATTAGCGTCTACGATTGCAGCACCGCTAAAGAGATTAGGGCTTTTGAAGTTCCCAATGTTCTGGCTGCTACCTTGTCGCCCTCCGGAACTTACTTGCAAACCTTCCAGAAACCTTCGGCGCCGCAAGAGAAGAACGTTACGCTGTGGAAAATTGAGAACGGTGTTGCTGTTTACCAACAGTCACAAAAGAACATGACAAAAGCCAATTGGCCTGCGATTCAGTTTAGTACTGATGAAGCTACTGCATGTCGGTTGGCAACTAATGAGGTACAATTTTTTGATACCGGAGATTTTTCAAAAGGAGTTGTCTGTCGGTTAAGAGTTCAGGGAGTTGCTGCTGCTGAGCTTTCTAGTTCACCTGGGTCTCATGTAGCTGCATTTGTTCCAGAATCCAAGGGGGTTCCTGCTAGTGTACAGATATTTGGTTGTGGAAATGCGTCTCAAAGTCAACCTGTTGCTCGTCGTAGTTTTTTCCGATGTTCAACCACCCAACTTAAATGGAATCACGGCTCAACTGGGCTTCTAGTGGTGGTGCAGTCAGATGTTGACAAAACTAATCAGAGTTACTATGGAGAATCAAAGTTATGCTATCTGACAACGGATGGGATGCATGAAGGACTTGTGCCTCTTCGGAAAGATGGGCCCATTCATGATGCTCAGTGGTCATATTCTGGCTTGGAATTTGCTGTTGTATATGGGTTTATGCCTGCTAAAGCAACTCTGTTCGACAAGAAGTGCAATCCTCTACTAGAGCTTGGAACTGGTCCTTACAACACTATTCGCTGGAACCCAAAAGGGAAATTTTTGTGTTTGGCTGGCTTTGGTAACTTGCCTGGTGATATGGTGTTCTGGGATTACATAGATAAGAAGCAACTTGGAGCCACTAAGGCTGAATGGTCTGTGACTAGTGAATGGTCTCCGGATGGGTGCTATTTCATGACAGCTACAACAGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTACAATGGGTCATTGTACTTCAAGAAGATGTTTGACAAATTGTACCAGGCTGATTGGAAACCAGAGTCACCCAGTAAGTTTGGTGATATTGCGGAATTAATTAAGTCTCTAAATTTGGTACAACTTGAAGATAAGAAACCATCAGGTCAAGGACCACCAAAGTCAACGCAAACTTCTACAAAAGCCTCTTCTGCCAACCCCCCAGCACAAAAACCTGCTGCATATCGTCCACCACATGCTAAGAATGCAGCTGCTATTCAGGCAGAGTTGTTTGGAGAGACTCCCTCAGAATCAATGAGCAAGAATGCATTACGAAACAAGAAAAAGAGGGAAAAACAGAAGGAGAAAAAGGCTGCTGATGCCAGTTCTTCATGA 1554 0.453 MASNSHSPPLEILVRGPEDFSLWTGPPFANGQPSVKLEKVNCVNAKFSDDGSKLMVTKSNSLISVYDCSTAKEIRAFEVPNVLAATLSPSGTYLQTFQKPSAPQEKNVTLWKIENGVAVYQQSQKNMTKANWPAIQFSTDEATACRLATNEVQFFDTGDFSKGVVCRLRVQGVAAAELSSSPGSHVAAFVPESKGVPASVQIFGCGNASQSQPVARRSFFRCSTTQLKWNHGSTGLLVVVQSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLRKDGPIHDAQWSYSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGATKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPESPSKFGDIAELIKSLNLVQLEDKKPSGQGPPKSTQTSTKASSANPPAQKPAAYRPPHAKNAAAIQAELFGETPSESMSKNALRNKKKREKQKEKKAADASSS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01457 517 MobiDBLite consensus disorder prediction 437 517 - -
Pumo1g01457 517 SUPERFAMILY DPP6 N-terminal domain-like 42 395 - -
Pumo1g01457 517 Gene3D - 28 195 IPR015943 GO:0005515
Pumo1g01457 517 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Pumo1g01457 517 FunFam Eukaryotic translation initiation factor 2A 30 185 - -
Pumo1g01457 517 Coils Coil 494 514 - -
Pumo1g01457 517 PIRSF Transl_init_eIF2A 4 517 IPR011387 GO:0003743|GO:0006413
Pumo1g01457 517 FunFam Eukaryotic translation initiation factor 2A 199 422 - -
Pumo1g01457 517 MobiDBLite consensus disorder prediction 443 460 - -
Pumo1g01457 517 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 513 IPR011387 GO:0003743|GO:0006413
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01457 68 418 Eukaryotic Initiation Factors Gene Family AT5G27640 24.346 9.80e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01457 K15026 - gmx:100810278 981.474