Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo1g01455 | ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTTTCAAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGAACATAAAAGGAGTCCCTGCTCTGTTGACCAAAGCAGTTATACTTCTATTGCATCTAATAAAAGGCAAAAGGCTGATTTATCGATCAGTACTAAGGAGAGGAAGGAGAAGATTGGCGAACGAATTGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGATTCCTTCATAAACAAGTTAAGCTGCTCAGTGCTCCATACCTTGAAAGTTCACCAGCAGCCAAGATGCAGGGTATGGAGCCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTGCCATTTACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATTAAGACTACTACATCACCTAAATTTGAGAAGGATGTCTCCCAATTTCATTGA | 507 | 0.4221 | MIASSFCNADSMFSREEGIDVRKMMEHKRSPCSVDQSSYTSIASNKRQKADLSISTKERKEKIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSPAAKMQGMEPCSLRSRGLCLVPVPFTIGVAESNGADIWAPIKTTTSPKFEKDVSQFH | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo1g01455 | 168 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 47 | 96 | IPR011598 | GO:0046983 | |
Pumo1g01455 | 168 | Gene3D | - | 43 | 115 | IPR036638 | GO:0046983 | |
Pumo1g01455 | 168 | CDD | bHLH_AtbHLH_like | 53 | 104 | IPR045239 | - | |
Pumo1g01455 | 168 | SMART | finulus | 53 | 102 | IPR011598 | GO:0046983 | |
Pumo1g01455 | 168 | FunFam | Transcription factor bHLH113 family | 46 | 122 | - | - | |
Pumo1g01455 | 168 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 45 | 135 | - | - | |
Pumo1g01455 | 168 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 46 | 110 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo1g01455 | Pumo-Chr1 | 23856616 | 23861620 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo1g01455 | 24 | 160 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G05710 | 55.346 | 1.38e-54 | 168 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo1g01455 | - | - | gmx:100809747 | 321.242 |