Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01442 ATGCATTCTGAGAGCAATCAAGTAATTGGGATGAAGAAAACGCTGATTTTTTGCAAAGGGCCCCATGAGACAAGAACTCGGTGGGTCATGCACGAATTGCGCCTCCTAACTTCCTACCCATGTCAGATGTCAGTGGCAGATTTTGCTGTGTATCGCATATTTCAGAAAAAGAAGATGAAGACAAAAAGATCTCATGGGAAGCCCTCTAGTGGCAGCAAAATTCAGAGAGTAGATGATGCTAAAGCCAGTTTCATAGACTTTACAGTGGAATTTGATCATGACGATATAGGGCCTCCACCACCTTGTTCCCCATGTCTAAGTGAAGGCTGTAGTGAAATCTCATCTAGCTAG 351 0.4359 MHSESNQVIGMKKTLIFCKGPHETRTRWVMHELRLLTSYPCQMSVADFAVYRIFQKKKMKTKRSHGKPSSGSKIQRVDDAKASFIDFTVEFDHDDIGPPPPCSPCLSEGCSEISSS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01442 116 Gene3D NAC domain 1 62 IPR036093 GO:0003677|GO:0006355
Pumo1g01442 116 MobiDBLite consensus disorder prediction 95 116 - -
Pumo1g01442 116 ProSiteProfiles NAC domain profile. 1 56 IPR003441 GO:0003677|GO:0006355
Pumo1g01442 116 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 68 - -
Pumo1g01442 116 SUPERFAMILY NAC domain 5 56 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01442 Pumo-Chr1 23662172 23665421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01442 3 62 NAC Transcription Factor Family AT5G13180 47.619 5.50e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01442 - - gmx:100815663 206.068